Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RB1P06400 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RB1P06400 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.6□□□□□ -1.19
RB1P06400 AL139184.1-202ENST00000422303 222 ntBASIC7.6□□□□□ -1.19
RB1P06400 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC7.6□□□□□ -1.19
RB1P06400 AC007383.1-201ENST00000445875 636 ntBASIC7.6□□□□□ -1.19
RB1P06400 EAF2-202ENST00000451944 960 ntTSL 2 BASIC7.6□□□□□ -1.19
RB1P06400 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.6□□□□□ -1.19
RB1P06400 SNORA81.1-201ENST00000458922 177 ntBASIC7.6□□□□□ -1.19
RB1P06400 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC7.6□□□□□ -1.19
RB1P06400 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7.6□□□□□ -1.19
RB1P06400 AC087360.1-201ENST00000518788 616 ntBASIC7.6□□□□□ -1.19
RB1P06400 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.6□□□□□ -1.19
RB1P06400 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.6□□□□□ -1.19
RB1P06400 GLYATL1P4-201ENST00000529326 906 ntBASIC7.6□□□□□ -1.19
RB1P06400 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.6□□□□□ -1.19
RB1P06400 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.6□□□□□ -1.19
RB1P06400 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC7.6□□□□□ -1.19
RB1P06400 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.6□□□□□ -1.19
RB1P06400 AL034374.2-201ENST00000605281 548 ntBASIC7.6□□□□□ -1.19
RB1P06400 GAPDHP41-201ENST00000613707 975 ntBASIC7.6□□□□□ -1.19
RB1P06400 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.6□□□□□ -1.19
RB1P06400 AC011471.4-201ENST00000638271 216 ntBASIC7.6□□□□□ -1.19
RB1P06400 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 HYDIN2-203ENST00000614586 13885 ntBASIC7.6□□□□□ -1.19
RB1P06400 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RB1P06400 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RB1P06400 AC090643.1-201ENST00000623600 3100 ntBASIC7.59□□□□□ -1.19
RB1P06400 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
RB1P06400 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RB1P06400 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RB1P06400 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RB1P06400 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RB1P06400 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
RB1P06400 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
RB1P06400 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RB1P06400 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RB1P06400 AC019178.1-201ENST00000392337 440 ntBASIC7.59□□□□□ -1.19
RB1P06400 AL359715.1-201ENST00000404330 555 ntBASIC7.59□□□□□ -1.19
RB1P06400 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.59□□□□□ -1.19
RB1P06400 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.59□□□□□ -1.19
RB1P06400 CDC42P6-201ENST00000421246 576 ntBASIC7.59□□□□□ -1.19
RB1P06400 AC000089.1-201ENST00000424559 801 ntBASIC7.59□□□□□ -1.19
RB1P06400 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.59□□□□□ -1.19
RB1P06400 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.59□□□□□ -1.19
RB1P06400 AC128677.1-201ENST00000436016 442 ntBASIC7.59□□□□□ -1.19
RB1P06400 RBMY2BP-202ENST00000451071 1156 ntBASIC7.59□□□□□ -1.19
RB1P06400 RBMY2HP-201ENST00000457961 720 ntBASIC7.59□□□□□ -1.19
RB1P06400 RPL23P10-201ENST00000468780 412 ntBASIC7.59□□□□□ -1.19
RB1P06400 MARK2P8-201ENST00000476069 952 ntBASIC7.59□□□□□ -1.19
RB1P06400 RN7SL70P-201ENST00000478322 302 ntBASIC7.59□□□□□ -1.19
RB1P06400 AC015524.1-201ENST00000491585 472 ntBASIC7.59□□□□□ -1.19
RB1P06400 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC7.59□□□□□ -1.19
RB1P06400 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.59□□□□□ -1.19
RB1P06400 OR4A41P-201ENST00000533053 928 ntBASIC7.59□□□□□ -1.19
RB1P06400 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.59□□□□□ -1.19
RB1P06400 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.59□□□□□ -1.19
RB1P06400 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.59□□□□□ -1.19
RB1P06400 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RB1P06400 NDUFB9P1-201ENST00000604683 510 ntBASIC7.59□□□□□ -1.19
RB1P06400 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.59□□□□□ -1.19
RB1P06400 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RB1P06400 ZNF969P-201ENST00000510345 2341 ntBASIC7.59□□□□□ -1.19
RB1P06400 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RB1P06400 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RB1P06400 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.19
RB1P06400 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RB1P06400 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RB1P06400 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.59□□□□□ -1.19
RB1P06400 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.2
RB1P06400 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
RB1P06400 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.59□□□□□ -1.2
RB1P06400 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
RB1P06400 AC087501.5-201ENST00000607496 2374 ntBASIC7.59□□□□□ -1.2
RB1P06400 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
RB1P06400 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
RB1P06400 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.58□□□□□ -1.2
RB1P06400 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.58□□□□□ -1.2
RB1P06400 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.58□□□□□ -1.2
RB1P06400 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.58□□□□□ -1.2
RB1P06400 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.58□□□□□ -1.2
RB1P06400 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.58□□□□□ -1.2
RB1P06400 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.58□□□□□ -1.2
RB1P06400 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.58□□□□□ -1.2
RB1P06400 AC026464.2-201ENST00000567834 2421 ntBASIC7.58□□□□□ -1.2
RB1P06400 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms