Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 APP-209ENST00000440126 2846 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AL162171.3-201ENST00000617439 3178 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AP003471.1-202ENST00000319051 1988 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC083799.1-201ENST00000366451 910 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 BX119904.3-201ENST00000428194 957 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 Z83313.1-201ENST00000433780 718 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 RSL24D1P8-201ENST00000434442 492 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AL954705.1-201ENST00000435277 559 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 NDUFA5P8-201ENST00000449019 346 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 MED28P7-201ENST00000456611 530 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 RPS14P7-201ENST00000473701 448 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 RPL23AP68-201ENST00000480924 445 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 RN7SL502P-201ENST00000481857 290 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AL591122.1-201ENST00000487348 492 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 RWDD4P1-201ENST00000488019 565 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 NACAP5-201ENST00000509863 636 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 GCSHP1-201ENST00000512554 484 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 RNU6-964P-201ENST00000516524 69 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC005229.3-201ENST00000603438 323 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 SNX29P2-204ENST00000603801 875 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC016405.2-201ENST00000607393 312 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AL023583.1-201ENST00000607518 1143 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 SNORD91A-202ENST00000609620 191 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AP000720.1-201ENST00000625091 483 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC140479.4-205ENST00000636339 820 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 HSP90AB7P-201ENST00000450068 2454 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 AC069222.1-201ENST00000608028 3360 ntBASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC187A0A096LP49 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 MIR191-201ENST00000384873 92 ntBASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 MIR99A-201ENST00000384906 81 ntBASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 AL590143.1-201ENST00000405071 138 ntBASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 SNRPEP5-201ENST00000425442 278 ntBASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 RPEP4-201ENST00000437636 602 ntBASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 AC009518.3-201ENST00000438972 253 ntBASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC187A0A096LP49 NPM1P9-201ENST00000453156 844 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms