Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 BRD7P6-201ENST00000431406 1860 ntBASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 MFSD8-256ENST00000641949 1640 ntBASIC7.6□□□□□ -1.19
CDK5RAP1Q96SZ6 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AL162171.3-201ENST00000617439 3178 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 OR52K3P-202ENST00000641797 1729 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AL137918.1-201ENST00000624542 1922 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 OR5T3-201ENST00000303059 1023 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AC074375.1-201ENST00000372993 192 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 GEMIN2P2-201ENST00000418195 715 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 MTCO2P17-201ENST00000424336 677 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 SALL1P1-201ENST00000438101 3837 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AL158214.1-201ENST00000444423 404 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 MTATP6P26-201ENST00000445926 662 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 RN7SL392P-201ENST00000473024 299 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 LARP7P4-201ENST00000481075 878 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 RN7SL775P-201ENST00000498361 336 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AC073648.3-201ENST00000504939 925 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AP003084.1-201ENST00000524828 742 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 OR7E161P-201ENST00000533722 967 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 NF1P12-201ENST00000549593 583 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AC126177.6-201ENST00000550420 1009 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AL031846.1-201ENST00000560933 314 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 VN1R87P-201ENST00000596706 487 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AC091544.5-201ENST00000620192 3815 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 HPVC1-201ENST00000629899 1198 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 AC091948.2-201ENST00000636510 279 ntBASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP1Q96SZ6 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
CDK5RAP1Q96SZ6 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms