Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NOX1-203ENST00000372964 661 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 PSMC1P2-201ENST00000423961 1204 ntBASIC10.8□□□□□ -0.68
VPS8Q8N3P4 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 VNN3-210ENST00000450865 596 ntTSL 4 BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 RN7SL70P-201ENST00000478322 302 ntBASIC10.8□□□□□ -0.68
VPS8Q8N3P4 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 AL591767.3-201ENST00000554632 525 ntBASIC10.8□□□□□ -0.68
VPS8Q8N3P4 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 GTF2IP6-201ENST00000583143 541 ntBASIC10.8□□□□□ -0.68
VPS8Q8N3P4 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS8Q8N3P4 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 Z97989.1-201ENST00000531702 2421 ntBASIC10.79□□□□□ -0.68
VPS8Q8N3P4 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 AC008753.1-201ENST00000423096 284 ntBASIC10.79□□□□□ -0.68
VPS8Q8N3P4 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 AC022080.2-201ENST00000452932 533 ntBASIC10.79□□□□□ -0.68
VPS8Q8N3P4 LECT2-203ENST00000512872 762 ntTSL 5 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 AC087575.1-201ENST00000585087 229 ntBASIC10.79□□□□□ -0.68
VPS8Q8N3P4 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS8Q8N3P4 AC092701.1-201ENST00000623627 1551 ntBASIC10.79□□□□□ -0.68
VPS8Q8N3P4 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 AC021074.2-201ENST00000468434 172 ntBASIC10.78□□□□□ -0.68
VPS8Q8N3P4 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 SLC25A14P1-201ENST00000502867 901 ntBASIC10.78□□□□□ -0.68
VPS8Q8N3P4 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 MINOS1P4-201ENST00000515470 318 ntBASIC10.78□□□□□ -0.68
VPS8Q8N3P4 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 OR4C49P-201ENST00000563891 900 ntBASIC10.78□□□□□ -0.68
VPS8Q8N3P4 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 AL590032.1-201ENST00000604920 252 ntBASIC10.78□□□□□ -0.68
VPS8Q8N3P4 HTR1DP1-201ENST00000616500 888 ntBASIC10.78□□□□□ -0.68
VPS8Q8N3P4 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 CA10-204ENST00000570565 2276 ntTSL 5 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS8Q8N3P4 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS8Q8N3P4 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC10.77□□□□□ -0.68
VPS8Q8N3P4 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS8Q8N3P4 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS8Q8N3P4 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
VPS8Q8N3P4 HBG2-204ENST00000444587 307 ntTSL 2 BASIC10.77□□□□□ -0.68
VPS8Q8N3P4 RN7SKP198-201ENST00000459286 306 ntBASIC10.77□□□□□ -0.68
VPS8Q8N3P4 AC009567.2-201ENST00000502989 349 ntBASIC10.77□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms