Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AL606490.2-201ENST00000457562 1330 ntBASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC6.4□□□□□ -1.39
LINC00346Q8IVM7 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 CTAGE11P-201ENST00000451540 2353 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 TAS2R2P-201ENST00000421146 910 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 GAPDHP46-201ENST00000424043 994 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 RPSAP62-201ENST00000432596 833 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 DEFA11P-201ENST00000446470 261 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC002486.2-201ENST00000447806 590 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 ATP5G1P6-201ENST00000451206 412 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AGKP1-201ENST00000455254 1263 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 RN7SL213P-201ENST00000463482 317 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 RPL34P22-201ENST00000468193 318 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC021074.2-201ENST00000468434 172 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 RPL7P17-201ENST00000470927 724 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC008967.1-201ENST00000504843 163 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 CCNHP1-201ENST00000513311 678 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC021146.10-201ENST00000515628 706 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AP004607.6-201ENST00000525033 1202 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 EIF1AXP2-201ENST00000555940 413 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC133569.1-201ENST00000564327 373 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 PPIAP14-201ENST00000577627 496 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 BOLA2P1-201ENST00000584794 232 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC009955.2-201ENST00000597288 542 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 MIR6732-201ENST00000619365 60 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC183089.2-201ENST00000637931 916 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AP000842.4-201ENST00000638781 748 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 MTCO1P8-201ENST00000416914 1523 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 KARSP2-201ENST00000415696 1639 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 AC005261.2-201ENST00000593427 4258 ntBASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LINC00346Q8IVM7 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LINC00346Q8IVM7 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.38□□□□□ -1.39
LINC00346Q8IVM7 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LINC00346Q8IVM7 OR52B5P-204ENST00000641744 3467 ntBASIC6.38□□□□□ -1.39
LINC00346Q8IVM7 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.38□□□□□ -1.39
LINC00346Q8IVM7 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms