Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 BCL9L-205ENST00000532899 611 ntTSL 514.04□□□□□ -0.168e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-212ENST00000433104 2490 ntTSL 212.78□□□□□ -0.368e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.69□□□□□ -0.388e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.53□□□□□ -0.48e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-203ENST00000412795 750 ntTSL 312.45□□□□□ -0.428e-7■□□□□ 10.7
PRPF8Q6P2Q9 PTK2-226ENST00000520917 653 ntTSL 412.35□□□□□ -0.438e-7■□□□□ 10.7
PRPF8Q6P2Q9 MXD4-203ENST00000513372 4228 ntTSL 211.9□□□□□ -0.52e-11■□□□□ 10.7
PRPF8Q6P2Q9 RAB5B-203ENST00000546810 589 ntTSL 211.62□□□□□ -0.558e-7■□□□□ 10.7
PRPF8Q6P2Q9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.578e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-207ENST00000416707 1260 ntTSL 1 (best)11.24□□□□□ -0.618e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-220ENST00000449563 580 ntTSL 411.17□□□□□ -0.628e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC11.04□□□□□ -0.648e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.668e-7■□□□□ 10.7
PRPF8Q6P2Q9 TMED10-203ENST00000555085 553 ntTSL 210.91□□□□□ -0.668e-7■□□□□ 10.7
PRPF8Q6P2Q9 TMED10-204ENST00000555873 1161 ntTSL 1 (best)10.91□□□□□ -0.668e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC10.79□□□□□ -0.688e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-214ENST00000436134 631 ntTSL 310.72□□□□□ -0.698e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC10.68□□□□□ -0.78e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-206ENST00000413654 553 ntTSL 410.51□□□□□ -0.738e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-225ENST00000455545 539 ntTSL 310.34□□□□□ -0.758e-7■□□□□ 10.7
PRPF8Q6P2Q9 SLC7A6-214ENST00000568024 581 ntTSL 410.09□□□□□ -0.798e-7■□□□□ 10.7
PRPF8Q6P2Q9 MED8-201ENST00000290663 1483 ntTSL 5 BASIC10.08□□□□□ -0.88e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-222ENST00000450045 689 ntTSL 3 BASIC9.98□□□□□ -0.818e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-224ENST00000454335 631 ntTSL 49.98□□□□□ -0.818e-7■□□□□ 10.7
PRPF8Q6P2Q9 RAB5B-204ENST00000548068 596 ntTSL 49.92□□□□□ -0.828e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-219ENST00000446860 1565 ntTSL 2 BASIC9.86□□□□□ -0.838e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC9.74□□□□□ -0.858e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-218ENST00000443964 973 ntTSL 4 BASIC9.64□□□□□ -0.878e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-204ENST00000412850 543 ntTSL 48.98□□□□□ -0.978e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-210ENST00000431721 2174 ntTSL 1 (best) BASIC8.87□□□□□ -0.998e-7■□□□□ 10.7
PRPF8Q6P2Q9 MED8-202ENST00000372455 1186 ntTSL 1 (best) BASIC8.62□□□□□ -1.038e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-215ENST00000437427 576 ntTSL 48.35□□□□□ -1.078e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-217ENST00000443853 579 ntTSL 38.35□□□□□ -1.078e-7■□□□□ 10.7
PRPF8Q6P2Q9 MED8-203ENST00000372457 1924 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.098e-7■□□□□ 10.7
PRPF8Q6P2Q9 IL4R-207ENST00000562968 531 ntTSL 37.94□□□□□ -1.148e-7■□□□□ 10.7
PRPF8Q6P2Q9 DUSP3-203ENST00000590753 1019 ntTSL 57.74□□□□□ -1.178e-7■□□□□ 10.7
PRPF8Q6P2Q9 DUSP3-204ENST00000590935 3666 ntTSL 57.02□□□□□ -1.298e-7■□□□□ 10.7
PRPF8Q6P2Q9 PTK2-209ENST00000518509 569 ntTSL 45.89□□□□□ -1.478e-7■□□□□ 10.7
PRPF8Q6P2Q9 SUCLG1-205ENST00000484365 1765 ntTSL 25.64□□□□□ -1.518e-7■□□□□ 10.7
PRPF8Q6P2Q9 SUCLG1-206ENST00000487809 762 ntTSL 25.39□□□□□ -1.558e-7■□□□□ 10.7
PRPF8Q6P2Q9 SIK3-213ENST00000497049 715 ntTSL 55.09□□□□□ -1.598e-7■□□□□ 10.7
PRPF8Q6P2Q9 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.68e-7■□□□□ 10.7
PRPF8Q6P2Q9 RAB5B-209ENST00000551459 569 ntTSL 44.72□□□□□ -1.658e-7■□□□□ 10.7
PRPF8Q6P2Q9 GPBP1L1-209ENST00000487436 560 ntTSL 24.5□□□□□ -1.691e-16■□□□□ 10.7
PRPF8Q6P2Q9 IDH1-209ENST00000484575 1044 ntTSL 23.95□□□□□ -1.788e-7■□□□□ 10.7
PRPF8Q6P2Q9 RAB5B-207ENST00000549915 494 ntTSL 42.52□□□□□ -2.018e-7■□□□□ 10.7
PRPF8Q6P2Q9 SUCLG1-208ENST00000491123 1073 ntTSL 31.74□□□□□ -2.138e-7■□□□□ 10.7
PRPF8Q6P2Q9 HDAC10-207ENST00000470378 1034 ntTSL 315.83■□□□□ 0.122e-9■□□□□ 10.7
PRPF8Q6P2Q9 HDAC10-211ENST00000476310 847 ntTSL 313.87□□□□□ -0.192e-9■□□□□ 10.7
PRPF8Q6P2Q9 CBFA2T3-208ENST00000566868 284 ntTSL 59.73□□□□□ -0.853e-7■□□□□ 10.7
PRPF8Q6P2Q9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.12■□□□□ 0.171e-15■□□□□ 10.7
PRPF8Q6P2Q9 TAPBP-235ENST00000437116 1239 ntTSL 1 (best)15.7■□□□□ 0.11e-15■□□□□ 10.7
PRPF8Q6P2Q9 TAPBP-240ENST00000480730 2202 ntTSL 1 (best)14.15□□□□□ -0.141e-15■□□□□ 10.7
PRPF8Q6P2Q9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21e-15■□□□□ 10.7
PRPF8Q6P2Q9 TAPBP-239ENST00000476333 726 ntTSL 213.67□□□□□ -0.221e-15■□□□□ 10.7
PRPF8Q6P2Q9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.23□□□□□ -0.293e-9■□□□□ 10.7
PRPF8Q6P2Q9 PFKP-210ENST00000468050 425 ntTSL 312.95□□□□□ -0.343e-9■□□□□ 10.7
PRPF8Q6P2Q9 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.34□□□□□ -0.431e-15■□□□□ 10.7
PRPF8Q6P2Q9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.451e-15■□□□□ 10.7
PRPF8Q6P2Q9 PFKP-209ENST00000460445 552 ntTSL 512.06□□□□□ -0.483e-9■□□□□ 10.7
PRPF8Q6P2Q9 PFKP-204ENST00000407806 705 ntTSL 511.92□□□□□ -0.53e-9■□□□□ 10.7
PRPF8Q6P2Q9 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.511e-15■□□□□ 10.7
PRPF8Q6P2Q9 PFKP-206ENST00000415005 1140 ntTSL 211.55□□□□□ -0.563e-9■□□□□ 10.7
PRPF8Q6P2Q9 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.653e-9■□□□□ 10.7
PRPF8Q6P2Q9 TAPBP-237ENST00000467025 751 ntTSL 310.81□□□□□ -0.681e-15■□□□□ 10.7
PRPF8Q6P2Q9 MADD-215ENST00000460452 794 ntTSL 38.98□□□□□ -0.971e-9■□□□□ 10.7
PRPF8Q6P2Q9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.492e-6■□□□□ 10.7
PRPF8Q6P2Q9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12□□□□□ -0.492e-20■□□□□ 10.7
PRPF8Q6P2Q9 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.52e-20■□□□□ 10.7
PRPF8Q6P2Q9 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.95□□□□□ -0.52e-20■□□□□ 10.7
PRPF8Q6P2Q9 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.532e-20■□□□□ 10.7
PRPF8Q6P2Q9 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.4□□□□□ -0.592e-20■□□□□ 10.7
PRPF8Q6P2Q9 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)11.37□□□□□ -0.592e-20■□□□□ 10.7
PRPF8Q6P2Q9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.246e-15■□□□□ 10.7
PRPF8Q6P2Q9 AC004674.1-201ENST00000458400 739 ntBASIC9.78□□□□□ -0.848e-10■□□□□ 10.7
PRPF8Q6P2Q9 SNORD42B-201ENST00000458893 67 ntBASIC-1.73□□□□□ -2.691e-11■□□□□ 10.7
PRPF8Q6P2Q9 SNORD58A-201ENST00000383875 65 ntBASIC-2.53□□□□□ -2.828e-10■□□□□ 10.7
PRPF8Q6P2Q9 PILRB-204ENST00000438028 1822 ntTSL 1 (best)16.17■□□□□ 0.183e-7■□□□□ 10.7
PRPF8Q6P2Q9 PILRB-206ENST00000443526 1364 ntTSL 1 (best)15.01□□□□□ -0.013e-7■□□□□ 10.7
PRPF8Q6P2Q9 PILRB-202ENST00000422808 1599 ntTSL 1 (best)14.84□□□□□ -0.033e-7■□□□□ 10.7
PRPF8Q6P2Q9 PILRB-201ENST00000419749 1506 ntTSL 1 (best)14.37□□□□□ -0.113e-7■□□□□ 10.7
PRPF8Q6P2Q9 PILRB-210ENST00000457519 2074 ntTSL 1 (best)13.5□□□□□ -0.253e-7■□□□□ 10.7
PRPF8Q6P2Q9 PILRB-209ENST00000455145 902 ntTSL 512.04□□□□□ -0.484e-8■□□□□ 10.7
PRPF8Q6P2Q9 PILRB-203ENST00000431140 772 ntTSL 311.72□□□□□ -0.533e-7■□□□□ 10.7
PRPF8Q6P2Q9 PILRB-211ENST00000493091 4345 ntTSL 210.78□□□□□ -0.682e-8■□□□□ 10.7
PRPF8Q6P2Q9 SLC29A2-204ENST00000541567 2272 ntTSL 1 (best)13.69□□□□□ -0.222e-7■□□□□ 10.7
PRPF8Q6P2Q9 NUCB1-204ENST00000424608 884 ntAPPRIS ALT2 TSL 517.05■□□□□ 0.323e-7■□□□□ 10.7
PRPF8Q6P2Q9 GIPR-204ENST00000588816 709 ntTSL 513.66□□□□□ -0.226e-7■□□□□ 10.7
PRPF8Q6P2Q9 SERPINA3-205ENST00000485588 575 ntTSL 1 (best)7.2□□□□□ -1.265e-17■□□□□ 10.7
PRPF8Q6P2Q9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.374e-10■□□□□ 10.7
PRPF8Q6P2Q9 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC11.88□□□□□ -0.516e-35■□□□□ 10.7
PRPF8Q6P2Q9 SNHG25-201ENST00000580828 106 ntTSL 210.42□□□□□ -0.746e-35■□□□□ 10.7
PRPF8Q6P2Q9 INTS6-205ENST00000461515 602 ntTSL 221.23■□□□□ 0.996e-18■□□□□ 10.7
PRPF8Q6P2Q9 INTS6-213ENST00000486195 555 ntTSL 420.47■□□□□ 0.875e-18■□□□□ 10.7
PRPF8Q6P2Q9 CEP192-213ENST00000585938 491 ntTSL 38.98□□□□□ -0.972e-6■□□□□ 10.7
PRPF8Q6P2Q9 SVIL-AS1-205ENST00000430295 440 ntTSL 218.4■□□□□ 0.546e-8■□□□□ 10.7
PRPF8Q6P2Q9 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.22□□□□□ -0.296e-8■□□□□ 10.7
PRPF8Q6P2Q9 SVIL-AS1-201ENST00000413405 767 ntTSL 1 (best)12.02□□□□□ -0.496e-8■□□□□ 10.7
PRPF8Q6P2Q9 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.06□□□□□ -0.646e-8■□□□□ 10.7
PRPF8Q6P2Q9 SVIL-AS1-211ENST00000609413 566 ntTSL 4 BASIC8.62□□□□□ -1.036e-8■□□□□ 10.7
Retrieved 100 of 73,762 protein–RNA pairs in 671.1 ms