RNA–Protein interactions for RNA: ENST00000484365.1

SUCLG1-205, Transcript of succinate-CoA ligase alpha subunit, humanhuman

TSL 2

Gene SUCLG1, Length 1,765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-205ENST00000484365 AEBP2Q6ZN18 517 aaPredicted RBP26.57■■□□□ 1.84
SUCLG1-205ENST00000484365 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.59
SUCLG1-205ENST00000484365 SENP3Q9H4L4 574 aaPredicted RBP22.84■■□□□ 1.25
SUCLG1-205ENST00000484365 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
SUCLG1-205ENST00000484365 FOXD1Q16676 465 aa21.26■□□□□ 0.99
SUCLG1-205ENST00000484365 POTEDQ86YR6 584 aa20.23■□□□□ 0.83
SUCLG1-205ENST00000484365 MSH5O43196 834 aa20.13■□□□□ 0.81
SUCLG1-205ENST00000484365 PIAS4Q8N2W9 510 aaPredicted RBP19.8■□□□□ 0.76
SUCLG1-205ENST00000484365 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
SUCLG1-205ENST00000484365 PPP6R1Q9UPN7 881 aa19.54■□□□□ 0.72
SUCLG1-205ENST00000484365 ADRA2BP18089 450 aa19.48■□□□□ 0.71
SUCLG1-205ENST00000484365 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
SUCLG1-205ENST00000484365 MAPK8IP2Q13387 824 aaPredicted RBP17.99■□□□□ 0.47
SUCLG1-205ENST00000484365 SCAF1Q9H7N4 1312 aaKnown RBP17.95■□□□□ 0.46
SUCLG1-205ENST00000484365 CACNB1Q02641 598 aaPredicted RBP17.48■□□□□ 0.39
SUCLG1-205ENST00000484365 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
SUCLG1-205ENST00000484365 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
SUCLG1-205ENST00000484365 HOXD11P31277 338 aaPredicted RBP17.2■□□□□ 0.34
SUCLG1-205ENST00000484365 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
SUCLG1-205ENST00000484365 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
SUCLG1-205ENST00000484365 RNF216Q9NWF9 866 aaPredicted RBP17■□□□□ 0.31
SUCLG1-205ENST00000484365 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
SUCLG1-205ENST00000484365 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
SUCLG1-205ENST00000484365 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
SUCLG1-205ENST00000484365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.42■□□□□ 0.223e-10■■■□□ 18
SUCLG1-205ENST00000484365 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
SUCLG1-205ENST00000484365 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
SUCLG1-205ENST00000484365 U3KPZ7 1027 aaPredicted RBP15.98■□□□□ 0.15
SUCLG1-205ENST00000484365 CAPN15O75808 1086 aa15.9■□□□□ 0.14
SUCLG1-205ENST00000484365 DSG3P32926 999 aa15.87■□□□□ 0.13
SUCLG1-205ENST00000484365 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
SUCLG1-205ENST00000484365 POTEHQ6S545 545 aa15.8■□□□□ 0.12
SUCLG1-205ENST00000484365 APLP2Q06481 763 aa15.64■□□□□ 0.09
SUCLG1-205ENST00000484365 SLC4A2P04920 1241 aa15.57■□□□□ 0.08
SUCLG1-205ENST00000484365 KCNA4P22459 653 aa15.54■□□□□ 0.08
SUCLG1-205ENST00000484365 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
SUCLG1-205ENST00000484365 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
SUCLG1-205ENST00000484365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
SUCLG1-205ENST00000484365 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
SUCLG1-205ENST00000484365 ABCB7O75027 752 aa15.44■□□□□ 0.06
SUCLG1-205ENST00000484365 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
SUCLG1-205ENST00000484365 RBM42Q9BTD8 480 aaKnown RBP15.24■□□□□ 0.03
SUCLG1-205ENST00000484365 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
SUCLG1-205ENST00000484365 POLA2Q14181 598 aa15.02□□□□□ -0.01
SUCLG1-205ENST00000484365 CHRDL2Q6WN34 429 aa14.99□□□□□ -0.01
SUCLG1-205ENST00000484365 ZBTB12Q9Y330 459 aaPredicted RBP14.78□□□□□ -0.04
SUCLG1-205ENST00000484365 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
SUCLG1-205ENST00000484365 FOXD4L1Q9NU39 408 aa14.68□□□□□ -0.06
SUCLG1-205ENST00000484365 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
SUCLG1-205ENST00000484365 ATF5Q9Y2D1 282 aaPredicted RBP14.65□□□□□ -0.06
SUCLG1-205ENST00000484365 SP7Q8TDD2 431 aaPredicted RBP14.64□□□□□ -0.07
SUCLG1-205ENST00000484365 REM2Q8IYK8 340 aaPredicted RBP14.6□□□□□ -0.07
SUCLG1-205ENST00000484365 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
SUCLG1-205ENST00000484365 PIP4P2Q8N4L2 257 aa14.53□□□□□ -0.08
SUCLG1-205ENST00000484365 PITPNM1O00562 1244 aa14.43□□□□□ -0.1
SUCLG1-205ENST00000484365 HAX1O00165 279 aa14.4□□□□□ -0.1
SUCLG1-205ENST00000484365 FXR2P51116 673 aaKnown RBP eCLIP14.4□□□□□ -0.1
SUCLG1-205ENST00000484365 ATXN8OSP0DMR3 200 aa14.31□□□□□ -0.12
SUCLG1-205ENST00000484365 SPDYE2BA6NHP3 402 aa14.25□□□□□ -0.13
SUCLG1-205ENST00000484365 SPDYE6P0CI01 402 aa14.25□□□□□ -0.13
SUCLG1-205ENST00000484365 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
SUCLG1-205ENST00000484365 ZBTB22O15209 634 aa14.24□□□□□ -0.13
SUCLG1-205ENST00000484365 FBLN2P98095 1184 aa14.23□□□□□ -0.13
SUCLG1-205ENST00000484365 EVX2Q03828 476 aa14.11□□□□□ -0.15
SUCLG1-205ENST00000484365 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
SUCLG1-205ENST00000484365 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
SUCLG1-205ENST00000484365 CLEC11AQ9Y240 323 aa14.06□□□□□ -0.16
SUCLG1-205ENST00000484365 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
SUCLG1-205ENST00000484365 SSUH2Q9Y2M2 353 aa13.99□□□□□ -0.17
SUCLG1-205ENST00000484365 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
SUCLG1-205ENST00000484365 C19orf67A6NJJ6 358 aa13.96□□□□□ -0.18
SUCLG1-205ENST00000484365 GABBR2O75899 941 aa13.83□□□□□ -0.19
SUCLG1-205ENST00000484365 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
SUCLG1-205ENST00000484365 CHADLQ6NUI6 762 aa13.79□□□□□ -0.2
SUCLG1-205ENST00000484365 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
SUCLG1-205ENST00000484365 CCDC180Q9P1Z9 1646 aa13.74□□□□□ -0.21
SUCLG1-205ENST00000484365 LHX8Q68G74 356 aa13.72□□□□□ -0.21
SUCLG1-205ENST00000484365 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
SUCLG1-205ENST00000484365 CD44P16070 742 aaKnown RBP13.61□□□□□ -0.23
SUCLG1-205ENST00000484365 CLCN6P51797 869 aa13.6□□□□□ -0.23
SUCLG1-205ENST00000484365 SHROOM4Q9ULL8 1493 aa13.59□□□□□ -0.23
SUCLG1-205ENST00000484365 FARP1Q9Y4F1 1045 aaPredicted RBP13.59□□□□□ -0.23
SUCLG1-205ENST00000484365 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
SUCLG1-205ENST00000484365 ZCCHC6Q5VYS8 1495 aaKnown RBP13.49□□□□□ -0.25
SUCLG1-205ENST00000484365 DCBLD2Q96PD2 775 aa13.43□□□□□ -0.26
SUCLG1-205ENST00000484365 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.26
SUCLG1-205ENST00000484365 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
SUCLG1-205ENST00000484365 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
SUCLG1-205ENST00000484365 CREBZFQ9NS37 354 aa13.32□□□□□ -0.28
SUCLG1-205ENST00000484365 SUPT5HO00267 1087 aaKnown RBP13.3□□□□□ -0.28
SUCLG1-205ENST00000484365 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
SUCLG1-205ENST00000484365 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
SUCLG1-205ENST00000484365 GALR2O43603 387 aaPredicted RBP13.21□□□□□ -0.29
SUCLG1-205ENST00000484365 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
SUCLG1-205ENST00000484365 DCAF1Q9Y4B6 1507 aa13.16□□□□□ -0.3
SUCLG1-205ENST00000484365 PLSCR2Q9NRY7 297 aa13.15□□□□□ -0.3
SUCLG1-205ENST00000484365 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.31
SUCLG1-205ENST00000484365 PHF12Q96QT6 1004 aa13.1□□□□□ -0.31
SUCLG1-205ENST00000484365 OTUD5Q96G74 571 aa13.09□□□□□ -0.31
SUCLG1-205ENST00000484365 POTEB2H3BUK9 544 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms