Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
RHBDL3P58872 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 RNA5SP152-201ENST00000365184 110 ntBASIC8.43□□□□□ -1.06
RHBDL3P58872 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC8.43□□□□□ -1.06
RHBDL3P58872 MIR551B-201ENST00000384984 96 ntBASIC8.43□□□□□ -1.06
RHBDL3P58872 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.43□□□□□ -1.06
RHBDL3P58872 AP000805.1-201ENST00000471604 784 ntBASIC8.43□□□□□ -1.06
RHBDL3P58872 AC146944.3-201ENST00000509969 371 ntBASIC8.43□□□□□ -1.06
RHBDL3P58872 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC8.43□□□□□ -1.06
RHBDL3P58872 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC8.43□□□□□ -1.06
RHBDL3P58872 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC8.43□□□□□ -1.06
RHBDL3P58872 AC079866.1-201ENST00000534985 1220 ntBASIC8.43□□□□□ -1.06
RHBDL3P58872 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 CHEK2P2-201ENST00000554701 672 ntBASIC8.43□□□□□ -1.06
RHBDL3P58872 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.43□□□□□ -1.06
RHBDL3P58872 AC010287.1-201ENST00000566916 357 ntBASIC8.43□□□□□ -1.06
RHBDL3P58872 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC8.43□□□□□ -1.06
RHBDL3P58872 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC8.43□□□□□ -1.06
RHBDL3P58872 AC011447.2-201ENST00000592921 283 ntBASIC8.43□□□□□ -1.06
RHBDL3P58872 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC8.43□□□□□ -1.06
RHBDL3P58872 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC8.43□□□□□ -1.06
RHBDL3P58872 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
RHBDL3P58872 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.43□□□□□ -1.06
RHBDL3P58872 LINC01616-201ENST00000561816 2280 ntBASIC8.43□□□□□ -1.06
RHBDL3P58872 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.43□□□□□ -1.06
RHBDL3P58872 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.43□□□□□ -1.06
RHBDL3P58872 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.43□□□□□ -1.06
RHBDL3P58872 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 KARSP2-201ENST00000415696 1639 ntBASIC8.43□□□□□ -1.06
RHBDL3P58872 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.43□□□□□ -1.06
RHBDL3P58872 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.43□□□□□ -1.06
RHBDL3P58872 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.43□□□□□ -1.06
RHBDL3P58872 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.43□□□□□ -1.06
RHBDL3P58872 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RHBDL3P58872 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.42□□□□□ -1.06
RHBDL3P58872 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
RHBDL3P58872 CCDC150P1-201ENST00000537123 2215 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RHBDL3P58872 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
RHBDL3P58872 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.42□□□□□ -1.06
RHBDL3P58872 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RHBDL3P58872 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RHBDL3P58872 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RHBDL3P58872 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC8.42□□□□□ -1.06
RHBDL3P58872 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.42□□□□□ -1.06
RHBDL3P58872 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.42□□□□□ -1.06
RHBDL3P58872 AL354794.2-201ENST00000424795 1248 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 AC007365.2-201ENST00000428806 458 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 AC018804.1-201ENST00000430381 618 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC8.42□□□□□ -1.06
RHBDL3P58872 E2F6P3-201ENST00000441743 743 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.42□□□□□ -1.06
RHBDL3P58872 AC090589.1-201ENST00000473109 362 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 PPP1R2P6-201ENST00000478565 588 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 SNRPCP11-201ENST00000492453 205 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 AK6-203ENST00000502819 743 ntTSL 5 BASIC8.42□□□□□ -1.06
RHBDL3P58872 AC091917.2-201ENST00000505002 744 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.42□□□□□ -1.06
RHBDL3P58872 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.42□□□□□ -1.06
RHBDL3P58872 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC8.42□□□□□ -1.06
RHBDL3P58872 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.42□□□□□ -1.06
RHBDL3P58872 AC021820.1-201ENST00000525564 808 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 OR4A1P-201ENST00000532342 920 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 PPIAP14-201ENST00000577627 496 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC8.42□□□□□ -1.06
RHBDL3P58872 AC104184.1-201ENST00000607513 721 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RHBDL3P58872 AP003400.2-201ENST00000624036 666 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
RHBDL3P58872 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
RHBDL3P58872 AC102941.1-201ENST00000567616 1537 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RHBDL3P58872 CDY19P-201ENST00000411668 1613 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 CDY18P-201ENST00000438294 1609 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 AC090771.1-201ENST00000585803 1618 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.42□□□□□ -1.06
RHBDL3P58872 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
RHBDL3P58872 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
RHBDL3P58872 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.42□□□□□ -1.06
RHBDL3P58872 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
RHBDL3P58872 AP002800.1-201ENST00000624982 2225 ntBASIC8.42□□□□□ -1.06
RHBDL3P58872 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
RHBDL3P58872 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RHBDL3P58872 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RHBDL3P58872 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RHBDL3P58872 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
RHBDL3P58872 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.41□□□□□ -1.06
RHBDL3P58872 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms