Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC079193.1-201ENST00000460497 588 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 RN7SL372P-201ENST00000461982 298 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 PABPC1P10-201ENST00000464731 381 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 RN7SL655P-201ENST00000486087 298 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 RN7SL306P-201ENST00000492941 296 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 BCAS2P1-201ENST00000528022 632 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AC138207.8-204ENST00000579588 527 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AC073575.2-201ENST00000614212 627 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 OR2A3P-202ENST00000641249 1776 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 LDHAP5-201ENST00000394996 622 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 RNA5SP280-201ENST00000411230 115 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC019070.1-201ENST00000415008 1024 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 RANP7-201ENST00000418085 644 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC234771.4-201ENST00000441416 730 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 HMGN1P32-201ENST00000441744 256 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 RPL21P33-201ENST00000444831 484 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 RPL31P11-202ENST00000454082 372 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC091982.1-202ENST00000473923 343 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC044810.1-201ENST00000480271 711 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 OR9A1P-202ENST00000484361 945 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 RN7SL350P-201ENST00000492591 299 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AP002981.1-201ENST00000517692 975 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 OR5F2P-201ENST00000532761 941 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC006518.1-201ENST00000541449 943 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AL135978.1-201ENST00000553618 1266 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 TMF1P1-201ENST00000576058 373 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC007620.3-201ENST00000608131 497 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC022743.1-201ENST00000624990 664 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 AC016930.1-201ENST00000468766 2205 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 CCDC150P1-201ENST00000537123 2215 ntBASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC187A0A096LP49 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms