Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 NACA-216ENST00000550952 2922 ntTSL 2 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 RNA5SP132-201ENST00000364725 118 ntBASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 RPL7AP14-201ENST00000424041 802 ntBASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 AL450996.1-201ENST00000445574 1202 ntBASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 DAP3-209ENST00000465375 729 ntTSL 2 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 OR52H2P-201ENST00000514607 902 ntBASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 AC068768.2-201ENST00000602352 343 ntBASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 TANGO6-201ENST00000261778 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
RIMBP3Q9UFD9 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 THSD7B-203ENST00000413152 5846 ntTSL 5 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AL133351.3-201ENST00000454998 193 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AC026336.1-201ENST00000466577 351 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 UCK2-205ENST00000469256 753 ntTSL 3 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AC027026.1-201ENST00000532323 742 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 MT1B-202ENST00000562399 351 ntTSL 3 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AL731566.2-201ENST00000618971 317 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 Six3os1_1.1-201ENST00000620900 87 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 SNORA16A-202ENST00000628458 135 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 RPL31P11-201ENST00000426558 1558 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 CASC19-238ENST00000641523 1558 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 FTH1P5-201ENST00000425761 545 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 SUMO2P3-201ENST00000438311 288 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 EIF3LP3-201ENST00000495197 822 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AC008055.1-201ENST00000547032 609 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 AC020914.7-201ENST00000594477 545 ntBASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 CCPG1-201ENST00000310958 6822 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RIMBP3Q9UFD9 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AC009163.7-201ENST00000621929 2557 ntBASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 ANKRD50-201ENST00000504087 8794 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms