Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AL589993.1-201ENST00000407450 2524 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC125603.4-201ENST00000621942 2699 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AP005139.1-201ENST00000580702 1647 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RSPO3Q9BXY4 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RSPO3Q9BXY4 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RSPO3Q9BXY4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.46□□□□□ -1.37
RSPO3Q9BXY4 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.46□□□□□ -1.37
RSPO3Q9BXY4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RSPO3Q9BXY4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 MIR301B-201ENST00000390813 78 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AC226101.1-201ENST00000401483 387 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 VDAC2P3-201ENST00000430995 828 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AL604028.2-201ENST00000437848 788 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AC125232.1-201ENST00000452554 1408 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 MED28P7-201ENST00000456611 530 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 RN7SL182P-201ENST00000496499 300 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 EEF1B2P2-201ENST00000519625 676 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AP003084.1-201ENST00000524828 742 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AL591767.3-201ENST00000554632 525 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AC091304.5-201ENST00000568969 158 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 PRR13P3-201ENST00000603578 376 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AC027271.1-201ENST00000610270 610 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 BX005040.2-201ENST00000620504 370 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 MAPK10-344ENST00000641718 3746 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AC022819.1-201ENST00000563495 3910 ntBASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RSPO3Q9BXY4 AC110716.2-201ENST00000563865 3945 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 AC005034.3-201ENST00000604845 1747 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 EPS15P1-202ENST00000459691 2071 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 AC007938.1-201ENST00000562524 2902 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 RPSAP44-201ENST00000406712 884 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 TYMSP1-201ENST00000407851 869 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 AC073900.1-201ENST00000429766 776 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 SDHCP3-201ENST00000445371 506 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 GTF2F2P2-201ENST00000445825 721 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 RN7SL815P-201ENST00000470970 290 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 SUMO2P7-201ENST00000511179 285 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 AC097460.2-201ENST00000511857 741 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 OR10J9P-201ENST00000511932 987 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 EIF3KP1-201ENST00000513279 656 ntBASIC6.45□□□□□ -1.38
RSPO3Q9BXY4 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms