Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RN7SL549P-201ENST00000478997 282 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX3Q99909 RN7SL635P-201ENST00000492123 296 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 AC079768.1-201ENST00000503181 711 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC6.19□□□□□ -1.42
SSX3Q99909 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC6.19□□□□□ -1.42
SSX3Q99909 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SSX3Q99909 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.19□□□□□ -1.42
SSX3Q99909 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.19□□□□□ -1.42
SSX3Q99909 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC6.19□□□□□ -1.42
SSX3Q99909 MIR4786-201ENST00000583954 80 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SSX3Q99909 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
SSX3Q99909 AL109936.2-201ENST00000605350 650 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 AL512413.1-201ENST00000606489 382 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC6.19□□□□□ -1.42
SSX3Q99909 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSX3Q99909 Z95114.1-201ENST00000624264 14574 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX3Q99909 AC106872.6-201ENST00000514228 1346 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 LPAL2-203ENST00000454031 2498 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SSX3Q99909 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SSX3Q99909 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX3Q99909 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SSX3Q99909 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.18□□□□□ -1.42
SSX3Q99909 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 RNA5SP79-201ENST00000365193 109 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SSX3Q99909 MIR301B-201ENST00000390813 78 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SSX3Q99909 AC009237.9-201ENST00000414800 347 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX3Q99909 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX3Q99909 TCEAL4P1-201ENST00000453620 588 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 AC004692.1-201ENST00000455430 424 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 FTH1P23-201ENST00000492727 550 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX3Q99909 AC100823.2-201ENST00000518337 699 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 AC008677.3-201ENST00000519146 666 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX3Q99909 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC6.18□□□□□ -1.42
SSX3Q99909 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.18□□□□□ -1.42
SSX3Q99909 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC6.18□□□□□ -1.42
SSX3Q99909 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX3Q99909 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX3Q99909 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.18□□□□□ -1.42
SSX3Q99909 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.18□□□□□ -1.42
SSX3Q99909 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX3Q99909 AC023310.4-201ENST00000613130 650 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 SLC20A1P2-201ENST00000618036 966 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC6.18□□□□□ -1.42
SSX3Q99909 AC012629.3-201ENST00000623397 328 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX3Q99909 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX3Q99909 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX3Q99909 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
SSX3Q99909 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 TUBBP10-201ENST00000427668 1301 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SSX3Q99909 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.18□□□□□ -1.42
SSX3Q99909 AL596244.1-201ENST00000567068 3779 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 AC005261.2-201ENST00000593427 4258 ntBASIC6.18□□□□□ -1.42
SSX3Q99909 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SSX3Q99909 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
SSX3Q99909 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX3Q99909 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX3Q99909 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.18□□□□□ -1.42
SSX3Q99909 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX3Q99909 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX3Q99909 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SSX3Q99909 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SSX3Q99909 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SSX3Q99909 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 MAPK10-357ENST00000641831 2858 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms