Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL133320.1-201ENST00000621423 2352 ntBASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 ZNF812P-201ENST00000457674 1694 ntBASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 AC244452.1-201ENST00000413798 141 ntBASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 FTOP1-201ENST00000419363 861 ntBASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 UBE2V2P3-201ENST00000433562 437 ntBASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 AL136455.1-201ENST00000441083 1240 ntBASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 AC040975.1-201ENST00000472104 316 ntBASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 AC008799.2-201ENST00000484429 647 ntBASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 RN7SKP242-201ENST00000515967 289 ntBASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 IGKV2-29-201ENST00000521304 372 ntBASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 AC125232.1-201ENST00000452554 1408 ntBASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC8.7□□□□□ -1.02
CHMP4CQ96CF2 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 LARS-212ENST00000510191 3737 ntTSL 2 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 RNA5SP442-201ENST00000365050 107 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 RBBP4P4-201ENST00000398588 1289 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 ARL4AP4-201ENST00000434170 518 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AC008496.1-201ENST00000509131 295 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 OR5F2P-201ENST00000532761 941 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AC103855.4-201ENST00000533158 265 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 UBE2CP4-201ENST00000561405 535 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 RN7SL366P-201ENST00000577957 292 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 MIR1273F-201ENST00000580581 99 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 RN7SL178P-201ENST00000582930 304 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 FXYD6P1-201ENST00000604857 285 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AC023206.1-201ENST00000605824 298 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AC103564.3-201ENST00000621194 220 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AC130448.2-201ENST00000624082 374 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 AC007342.9-201ENST00000623877 1385 ntBASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
CHMP4CQ96CF2 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHMP4CQ96CF2 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHMP4CQ96CF2 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHMP4CQ96CF2 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.68□□□□□ -1.02
CHMP4CQ96CF2 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHMP4CQ96CF2 AL034417.4-202ENST00000642135 2236 ntBASIC8.68□□□□□ -1.02
CHMP4CQ96CF2 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.68□□□□□ -1.02
CHMP4CQ96CF2 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHMP4CQ96CF2 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHMP4CQ96CF2 RPL10P16-201ENST00000325000 645 ntBASIC8.68□□□□□ -1.02
CHMP4CQ96CF2 AC074375.1-201ENST00000372993 192 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms