Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 HSD3BP3-201ENST00000514706 994 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 AC120036.3-201ENST00000517826 292 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 SAA3P-201ENST00000533267 365 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 AC140063.1-201ENST00000541343 259 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 AC026458.1-201ENST00000564330 438 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 ACTG1P15-201ENST00000570019 1063 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 AC063977.7-201ENST00000594454 337 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 AL035410.2-201ENST00000604963 864 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 MIR6862-1-201ENST00000613016 70 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 MIR6862-2-201ENST00000614755 70 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 AL390882.1-201ENST00000618821 594 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 IFIT1P1-201ENST00000400497 1449 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 TPTE2P2-201ENST00000403471 1466 ntBASIC8.48□□□□□ -1.05
SNED1Q8TER0 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 SNORA11B-201ENST00000408175 129 ntBASIC8.48□□□□□ -1.05
SNED1Q8TER0 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 ATP5A1P8-201ENST00000423669 1291 ntBASIC8.48□□□□□ -1.05
SNED1Q8TER0 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 AL583856.1-201ENST00000454078 1101 ntBASIC8.48□□□□□ -1.05
SNED1Q8TER0 AC083806.1-201ENST00000468934 316 ntBASIC8.48□□□□□ -1.05
SNED1Q8TER0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 RN7SL753P-201ENST00000581238 290 ntBASIC8.48□□□□□ -1.05
SNED1Q8TER0 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 AL589765.6-201ENST00000601909 549 ntBASIC8.48□□□□□ -1.05
SNED1Q8TER0 AL513548.2-201ENST00000602994 1207 ntBASIC8.48□□□□□ -1.05
SNED1Q8TER0 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 AC006328.2-201ENST00000623198 397 ntBASIC8.48□□□□□ -1.05
SNED1Q8TER0 AC012005.2-201ENST00000624333 397 ntBASIC8.48□□□□□ -1.05
SNED1Q8TER0 AC004943.1-203ENST00000624370 1074 ntBASIC8.48□□□□□ -1.05
SNED1Q8TER0 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 SAMMSON-222ENST00000641901 2727 ntBASIC8.48□□□□□ -1.05
SNED1Q8TER0 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.48□□□□□ -1.05
SNED1Q8TER0 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNED1Q8TER0 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.47□□□□□ -1.05
SNED1Q8TER0 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 RPL17P17-201ENST00000419491 557 ntBASIC8.47□□□□□ -1.05
SNED1Q8TER0 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 KCTD9P1-201ENST00000430462 1167 ntBASIC8.47□□□□□ -1.05
SNED1Q8TER0 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 AC093166.3-201ENST00000448785 303 ntBASIC8.47□□□□□ -1.05
SNED1Q8TER0 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 MAST4-IT1-201ENST00000514241 658 ntBASIC8.47□□□□□ -1.05
SNED1Q8TER0 TRIM51DP-201ENST00000529746 596 ntBASIC8.47□□□□□ -1.05
SNED1Q8TER0 NDUFA5P11-201ENST00000567995 343 ntBASIC8.47□□□□□ -1.05
SNED1Q8TER0 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 AC073592.6-201ENST00000624271 415 ntBASIC8.47□□□□□ -1.05
SNED1Q8TER0 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms