Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNA5SP101-201ENST00000517036 108 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 IGKV1D-32-201ENST00000517449 318 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC8.9□□□□□ -0.98
ERCC3P19447 AP003355.1-201ENST00000518956 587 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC8.9□□□□□ -0.98
ERCC3P19447 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC8.9□□□□□ -0.98
ERCC3P19447 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.9□□□□□ -0.98
ERCC3P19447 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.9□□□□□ -0.98
ERCC3P19447 AC090607.2-201ENST00000560331 695 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC8.9□□□□□ -0.98
ERCC3P19447 AC084759.1-201ENST00000561168 290 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC8.9□□□□□ -0.98
ERCC3P19447 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC8.9□□□□□ -0.98
ERCC3P19447 AL357094.1-201ENST00000603845 844 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 DIMT1P1-201ENST00000603970 763 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 AC103564.3-201ENST00000621194 220 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC8.9□□□□□ -0.98
ERCC3P19447 TEX41-279ENST00000629149 609 ntTSL 5 BASIC8.9□□□□□ -0.98
ERCC3P19447 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC8.9□□□□□ -0.98
ERCC3P19447 OR5AC4P-202ENST00000642086 985 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC8.9□□□□□ -0.98
ERCC3P19447 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.9□□□□□ -0.98
ERCC3P19447 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.9□□□□□ -0.99
ERCC3P19447 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
ERCC3P19447 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
ERCC3P19447 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
ERCC3P19447 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.99
ERCC3P19447 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
ERCC3P19447 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
ERCC3P19447 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 AC110716.2-201ENST00000563865 3945 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
ERCC3P19447 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.89□□□□□ -0.99
ERCC3P19447 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
ERCC3P19447 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
ERCC3P19447 KRTAP3-3-201ENST00000391586 704 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
ERCC3P19447 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 H2AFZP3-201ENST00000394213 387 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 VDAC1P8-201ENST00000406025 853 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC8.89□□□□□ -0.99
ERCC3P19447 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC8.89□□□□□ -0.99
ERCC3P19447 MTND2P2-201ENST00000434633 945 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC8.89□□□□□ -0.99
ERCC3P19447 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC8.89□□□□□ -0.99
ERCC3P19447 AL137074.1-201ENST00000442640 465 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.89□□□□□ -0.99
ERCC3P19447 RPS26P41-201ENST00000450370 284 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
ERCC3P19447 CASC8-201ENST00000501396 930 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.89□□□□□ -0.99
ERCC3P19447 Vault.2-201ENST00000516519 98 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC8.89□□□□□ -0.99
ERCC3P19447 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC8.89□□□□□ -0.99
ERCC3P19447 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC8.89□□□□□ -0.99
ERCC3P19447 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC8.89□□□□□ -0.99
ERCC3P19447 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC8.89□□□□□ -0.99
ERCC3P19447 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC8.89□□□□□ -0.99
ERCC3P19447 NPM1P5-201ENST00000557228 838 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 AC044860.3-201ENST00000559957 368 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC8.89□□□□□ -0.99
ERCC3P19447 AC011193.2-201ENST00000582638 367 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 AC007136.1-201ENST00000589141 199 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 AL512430.4-201ENST00000603085 613 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 RN7SL715P-201ENST00000606972 286 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 AC004775.1-201ENST00000607389 753 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC8.89□□□□□ -0.99
ERCC3P19447 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.89□□□□□ -0.99
ERCC3P19447 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
ERCC3P19447 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
ERCC3P19447 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
ERCC3P19447 AC051619.3-201ENST00000560646 2426 ntBASIC8.89□□□□□ -0.99
ERCC3P19447 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ERCC3P19447 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms