Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 AL023875.1-201ENST00000640777 796 ntBASIC24.55■■□□□ 1.52
TNFRSF11AQ9Y6Q6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TNFRSF11AQ9Y6Q6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC24.55■■□□□ 1.52
TNFRSF11AQ9Y6Q6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TNFRSF11AQ9Y6Q6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TNFRSF11AQ9Y6Q6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
TNFRSF11AQ9Y6Q6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TNFRSF11AQ9Y6Q6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 AL691432.2-201ENST00000607222 2038 ntBASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 C1QBPP2-201ENST00000528754 825 ntBASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TNFRSF11AQ9Y6Q6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.53■■□□□ 1.52
TNFRSF11AQ9Y6Q6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TNFRSF11AQ9Y6Q6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 AC124016.1-201ENST00000609552 612 ntBASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.51■■□□□ 1.51
TNFRSF11AQ9Y6Q6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.5■■□□□ 1.51
TNFRSF11AQ9Y6Q6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC24.49■■□□□ 1.51
TNFRSF11AQ9Y6Q6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms