Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 PKD1P6-201ENST00000343738 4769 ntBASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA1Q9Y5H4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 GUSBP5-202ENST00000510805 1989 ntBASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 NTF6B-201ENST00000591913 560 ntBASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 AL031985.4-201ENST00000642138 673 ntBASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGA1Q9Y5H4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 AC104076.2-201ENST00000448912 469 ntBASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 FSCN1P1-201ENST00000568912 1481 ntBASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGA1Q9Y5H4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 C2orf69P3-201ENST00000565542 1120 ntBASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 AC087388.1-201ENST00000571370 1112 ntBASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 AC026271.3-201ENST00000571884 352 ntBASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA1Q9Y5H4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA1Q9Y5H4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA1Q9Y5H4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms