Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDHB2Q9Y5E7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB2Q9Y5E7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB2Q9Y5E7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB2Q9Y5E7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHB2Q9Y5E7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB2Q9Y5E7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PCDHB2Q9Y5E7 LINC01006-201ENST00000333319 2292 ntBASIC21.9■■□□□ 1.1
PCDHB2Q9Y5E7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB2Q9Y5E7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHB2Q9Y5E7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHB2Q9Y5E7 AL121603.2-201ENST00000557373 2117 ntBASIC21.89■■□□□ 1.1
PCDHB2Q9Y5E7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHB2Q9Y5E7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHB2Q9Y5E7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 KRASP1-201ENST00000407852 552 ntBASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 GABARAPL3-202ENST00000624044 1851 ntBASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB2Q9Y5E7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB2Q9Y5E7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 AC110285.5-201ENST00000611501 352 ntBASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHB2Q9Y5E7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB2Q9Y5E7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 AC124283.5-201ENST00000624661 1809 ntBASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 MIR4497-201ENST00000583208 89 ntBASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms