Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC00588Q9Y4M8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.71□□□□□ -0.22
LINC00588Q9Y4M8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
LINC00588Q9Y4M8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
LINC00588Q9Y4M8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00588Q9Y4M8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00588Q9Y4M8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00588Q9Y4M8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 AL137060.1-201ENST00000618151 2648 ntBASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 Z99916.2-201ENST00000604037 246 ntBASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00588Q9Y4M8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00588Q9Y4M8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.68□□□□□ -0.22
LINC00588Q9Y4M8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms