Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PPP4R2Q9NY27 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
PPP4R2Q9NY27 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PPP4R2Q9NY27 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PPP4R2Q9NY27 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PPP4R2Q9NY27 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC25.57■■□□□ 1.68
PPP4R2Q9NY27 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 AC099791.1-201ENST00000416440 715 ntBASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 AC120498.10-201ENST00000621827 505 ntBASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
PPP4R2Q9NY27 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC25.55■■□□□ 1.68
PPP4R2Q9NY27 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 AL356441.2-201ENST00000443009 864 ntBASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 CROCCP3-202ENST00000420820 1947 ntBASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R2Q9NY27 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R2Q9NY27 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PPP4R2Q9NY27 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R2Q9NY27 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R2Q9NY27 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R2Q9NY27 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PPP4R2Q9NY27 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R2Q9NY27 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
PPP4R2Q9NY27 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.53■■□□□ 1.68
PPP4R2Q9NY27 AL049812.1-201ENST00000432563 2267 ntBASIC25.53■■□□□ 1.68
PPP4R2Q9NY27 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R2Q9NY27 KRT87P-202ENST00000534226 1464 ntBASIC25.53■■□□□ 1.68
PPP4R2Q9NY27 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 AC012414.1-201ENST00000556676 535 ntBASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
PPP4R2Q9NY27 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 AL136162.1-201ENST00000607711 1078 ntBASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC25.51■■□□□ 1.67
PPP4R2Q9NY27 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms