Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAR1Q9NY12 ABHD17AP1-201ENST00000358206 933 ntBASIC16.18■□□□□ 0.18
GAR1Q9NY12 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GAR1Q9NY12 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 DUX4L2-201ENST00000561772 1275 ntBASIC16.18■□□□□ 0.18
GAR1Q9NY12 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GAR1Q9NY12 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 DUX4L6-201ENST00000626483 1275 ntBASIC16.18■□□□□ 0.18
GAR1Q9NY12 DUX4L1-201ENST00000627662 1275 ntBASIC16.18■□□□□ 0.18
GAR1Q9NY12 DUX4L8-201ENST00000629013 1275 ntBASIC16.18■□□□□ 0.18
GAR1Q9NY12 DUX4L3-201ENST00000630187 1275 ntBASIC16.18■□□□□ 0.18
GAR1Q9NY12 DUX4L7-201ENST00000630678 1275 ntBASIC16.18■□□□□ 0.18
GAR1Q9NY12 DUX4L5-201ENST00000630834 1275 ntBASIC16.18■□□□□ 0.18
GAR1Q9NY12 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAR1Q9NY12 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAR1Q9NY12 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAR1Q9NY12 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.18■□□□□ 0.18
GAR1Q9NY12 AC005332.8-201ENST00000622750 2735 ntBASIC16.18■□□□□ 0.18
GAR1Q9NY12 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 AC245052.3-201ENST00000450182 901 ntBASIC16.17■□□□□ 0.18
GAR1Q9NY12 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 KRT18P20-201ENST00000548986 1279 ntBASIC16.17■□□□□ 0.18
GAR1Q9NY12 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAR1Q9NY12 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
GAR1Q9NY12 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
GAR1Q9NY12 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
GAR1Q9NY12 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.16■□□□□ 0.18
GAR1Q9NY12 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.16■□□□□ 0.18
GAR1Q9NY12 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
GAR1Q9NY12 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 AC010141.2-201ENST00000452426 721 ntBASIC16.16■□□□□ 0.18
GAR1Q9NY12 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GAR1Q9NY12 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
GAR1Q9NY12 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.16■□□□□ 0.18
GAR1Q9NY12 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GAR1Q9NY12 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAR1Q9NY12 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GAR1Q9NY12 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GAR1Q9NY12 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GAR1Q9NY12 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GAR1Q9NY12 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GAR1Q9NY12 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
GAR1Q9NY12 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GAR1Q9NY12 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.15■□□□□ 0.18
GAR1Q9NY12 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GAR1Q9NY12 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GAR1Q9NY12 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
GAR1Q9NY12 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
GAR1Q9NY12 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GAR1Q9NY12 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
GAR1Q9NY12 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
GAR1Q9NY12 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms