Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 DUX4L2-201ENST00000561772 1275 ntBASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 DUX4L6-201ENST00000626483 1275 ntBASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 DUX4L1-201ENST00000627662 1275 ntBASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 DUX4L8-201ENST00000629013 1275 ntBASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 DUX4L3-201ENST00000630187 1275 ntBASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 DUX4L7-201ENST00000630678 1275 ntBASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 DUX4L5-201ENST00000630834 1275 ntBASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
FOXD4L1Q9NU39 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.83■■□□□ 1.4
FOXD4L1Q9NU39 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 AC091799.1-201ENST00000422823 811 ntBASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
FOXD4L1Q9NU39 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 AC105265.2-201ENST00000467189 838 ntBASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 BX119927.1-201ENST00000636596 1552 ntBASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 AC093484.2-201ENST00000580996 2166 ntBASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FOXD4L1Q9NU39 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.8■■□□□ 1.4
FOXD4L1Q9NU39 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 RN7SL440P-201ENST00000577855 343 ntBASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 AC092723.2-201ENST00000624955 793 ntBASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 AC005332.7-201ENST00000614046 2005 ntBASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
FOXD4L1Q9NU39 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
FOXD4L1Q9NU39 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.78■■□□□ 1.4
FOXD4L1Q9NU39 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms