Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 LINC01023-201ENST00000606054 436 ntBASIC19.71■□□□□ 0.75
POLR1BQ9H9Y6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POLR1BQ9H9Y6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.71■□□□□ 0.75
POLR1BQ9H9Y6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
POLR1BQ9H9Y6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR1BQ9H9Y6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.71■□□□□ 0.75
POLR1BQ9H9Y6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.71■□□□□ 0.75
POLR1BQ9H9Y6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR1BQ9H9Y6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR1BQ9H9Y6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR1BQ9H9Y6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
POLR1BQ9H9Y6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR1BQ9H9Y6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 AC012618.2-201ENST00000428058 849 ntBASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1BQ9H9Y6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
POLR1BQ9H9Y6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms