Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN3Q9H347 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 HLA-B-256ENST00000639848 1089 ntBASIC18.49■□□□□ 0.55
UBQLN3Q9H347 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN3Q9H347 AC007952.6-201ENST00000573168 2673 ntBASIC18.48■□□□□ 0.55
UBQLN3Q9H347 AC003957.1-201ENST00000625108 2673 ntBASIC18.48■□□□□ 0.55
UBQLN3Q9H347 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 C2orf69P4-201ENST00000565394 541 ntBASIC18.48■□□□□ 0.55
UBQLN3Q9H347 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.48■□□□□ 0.55
UBQLN3Q9H347 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 UNC93B5-201ENST00000530315 699 ntBASIC18.47■□□□□ 0.55
UBQLN3Q9H347 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 AC060766.5-201ENST00000590539 871 ntBASIC18.47■□□□□ 0.55
UBQLN3Q9H347 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 MIR2861-201ENST00000636310 90 ntBASIC18.47■□□□□ 0.55
UBQLN3Q9H347 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
UBQLN3Q9H347 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN3Q9H347 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms