Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 RPPH1-201ENST00000516869 333 ntBASIC22.01■■□□□ 1.11
RNF39Q9H2S5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF39Q9H2S5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF39Q9H2S5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22■■□□□ 1.11
RNF39Q9H2S5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
RNF39Q9H2S5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF39Q9H2S5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RNF39Q9H2S5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF39Q9H2S5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF39Q9H2S5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22■■□□□ 1.11
RNF39Q9H2S5 AL022319.1-201ENST00000458183 1167 ntBASIC22■■□□□ 1.11
RNF39Q9H2S5 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC22■■□□□ 1.11
RNF39Q9H2S5 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC22■■□□□ 1.11
RNF39Q9H2S5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22■■□□□ 1.11
RNF39Q9H2S5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22■■□□□ 1.11
RNF39Q9H2S5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22■■□□□ 1.11
RNF39Q9H2S5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22■■□□□ 1.11
RNF39Q9H2S5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF39Q9H2S5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22■■□□□ 1.11
RNF39Q9H2S5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
RNF39Q9H2S5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 C1QBPP2-201ENST00000528754 825 ntBASIC21.99■■□□□ 1.11
RNF39Q9H2S5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 AL021368.1-201ENST00000607490 540 ntBASIC21.99■■□□□ 1.11
RNF39Q9H2S5 AC120498.8-201ENST00000614275 531 ntBASIC21.99■■□□□ 1.11
RNF39Q9H2S5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF39Q9H2S5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 AP003400.5-201ENST00000624827 617 ntBASIC21.98■■□□□ 1.11
RNF39Q9H2S5 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 AC079834.2-201ENST00000609776 1949 ntBASIC21.98■■□□□ 1.11
RNF39Q9H2S5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.98■■□□□ 1.11
RNF39Q9H2S5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 AC133552.4-201ENST00000576103 676 ntBASIC21.97■■□□□ 1.11
RNF39Q9H2S5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 AP006294.2-201ENST00000641667 209 ntBASIC21.97■■□□□ 1.11
RNF39Q9H2S5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF39Q9H2S5 AL121603.2-201ENST00000557373 2117 ntBASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms