Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VPS11Q9H270 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS11Q9H270 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.06■□□□□ 0.8
VPS11Q9H270 CDV3P1-201ENST00000471403 739 ntBASIC20.06■□□□□ 0.8
VPS11Q9H270 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS11Q9H270 AC093484.2-201ENST00000580996 2166 ntBASIC20.06■□□□□ 0.8
VPS11Q9H270 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.06■□□□□ 0.8
VPS11Q9H270 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.06■□□□□ 0.8
VPS11Q9H270 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VPS11Q9H270 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
VPS11Q9H270 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS11Q9H270 AC004408.2-201ENST00000623613 2777 ntBASIC20.06■□□□□ 0.8
VPS11Q9H270 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.05■□□□□ 0.8
VPS11Q9H270 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS11Q9H270 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS11Q9H270 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS11Q9H270 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.05■□□□□ 0.8
VPS11Q9H270 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
VPS11Q9H270 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
VPS11Q9H270 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.05■□□□□ 0.8
VPS11Q9H270 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS11Q9H270 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS11Q9H270 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS11Q9H270 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS11Q9H270 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS11Q9H270 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS11Q9H270 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.05■□□□□ 0.8
VPS11Q9H270 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.05■□□□□ 0.8
VPS11Q9H270 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS11Q9H270 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.05■□□□□ 0.8
VPS11Q9H270 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS11Q9H270 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
VPS11Q9H270 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
VPS11Q9H270 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS11Q9H270 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS11Q9H270 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
VPS11Q9H270 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS11Q9H270 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS11Q9H270 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS11Q9H270 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS11Q9H270 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS11Q9H270 TREX1-205ENST00000625293 1783 ntBASIC20.04■□□□□ 0.8
VPS11Q9H270 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS11Q9H270 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS11Q9H270 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS11Q9H270 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS11Q9H270 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
VPS11Q9H270 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS11Q9H270 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS11Q9H270 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS11Q9H270 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS11Q9H270 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VPS11Q9H270 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VPS11Q9H270 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.03■□□□□ 0.8
VPS11Q9H270 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.03■□□□□ 0.8
VPS11Q9H270 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VPS11Q9H270 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.03■□□□□ 0.8
VPS11Q9H270 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS11Q9H270 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VPS11Q9H270 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VPS11Q9H270 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VPS11Q9H270 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
VPS11Q9H270 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS11Q9H270 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
VPS11Q9H270 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS11Q9H270 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VPS11Q9H270 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.02■□□□□ 0.8
VPS11Q9H270 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS11Q9H270 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.02■□□□□ 0.8
VPS11Q9H270 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS11Q9H270 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS11Q9H270 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VPS11Q9H270 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VPS11Q9H270 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS11Q9H270 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
VPS11Q9H270 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.02■□□□□ 0.8
VPS11Q9H270 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS11Q9H270 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VPS11Q9H270 KRT19P1-201ENST00000405746 1186 ntBASIC20.02■□□□□ 0.8
VPS11Q9H270 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.02■□□□□ 0.8
VPS11Q9H270 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VPS11Q9H270 UBE2DNL-204ENST00000602536 740 ntBASIC20.02■□□□□ 0.8
VPS11Q9H270 BX119927.1-201ENST00000636596 1552 ntBASIC20.02■□□□□ 0.8
VPS11Q9H270 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS11Q9H270 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS11Q9H270 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS11Q9H270 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VPS11Q9H270 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VPS11Q9H270 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.02■□□□□ 0.79
VPS11Q9H270 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VPS11Q9H270 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS11Q9H270 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VPS11Q9H270 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
VPS11Q9H270 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS11Q9H270 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
VPS11Q9H270 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS11Q9H270 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.01■□□□□ 0.79
VPS11Q9H270 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS11Q9H270 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS11Q9H270 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms