Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 LINC00565-201ENST00000562710 2331 ntBASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 HLA-G-203ENST00000376818 1127 ntBASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3Q9BZ76 EP400NL-214ENST00000641289 2402 ntBASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 LINC01960-201ENST00000563759 1884 ntBASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 ATP5G2P1-201ENST00000433580 426 ntBASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 AL359075.1-203ENST00000462729 1002 ntBASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3Q9BZ76 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 NIFKP9-201ENST00000419265 221 ntBASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 UNC93B7-201ENST00000509439 705 ntBASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 MIR3652-201ENST00000579335 131 ntBASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 AC117500.6-201ENST00000624871 588 ntBASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNTNAP3Q9BZ76 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 HOMER2P1-201ENST00000455653 964 ntBASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 VENTXP5-201ENST00000523979 775 ntBASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms