Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 IKBKGP1-201ENST00000612193 1073 ntBASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO3Q9BXY4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 AL031963.3-201ENST00000606441 850 ntBASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 AL050303.2-201ENST00000619798 666 ntBASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO3Q9BXY4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 RNF165-205ENST00000588679 2904 ntBASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 AC007322.1-201ENST00000426983 750 ntBASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 AC231657.2-201ENST00000624556 255 ntBASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RSPO3Q9BXY4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO3Q9BXY4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 OR10C1-204ENST00000622521 1039 ntBASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO3Q9BXY4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms