Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 BX119927.1-201ENST00000636596 1552 ntBASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 AP005435.1-201ENST00000529293 1178 ntBASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 KRT125P-201ENST00000546827 989 ntBASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 HSD17B1P1-201ENST00000590052 955 ntBASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 SMUG1P1-201ENST00000590640 811 ntBASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 MIR2861-201ENST00000636310 90 ntBASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 AC090340.1-201ENST00000620778 4980 ntBASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC22CQ9BRL7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SEC22CQ9BRL7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SEC22CQ9BRL7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.29
SEC22CQ9BRL7 AL133373.2-201ENST00000623187 2828 ntBASIC16.83■□□□□ 0.29
SEC22CQ9BRL7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SEC22CQ9BRL7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SEC22CQ9BRL7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SEC22CQ9BRL7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 DPP3P2-201ENST00000416030 1696 ntBASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 AC009113.1-201ENST00000570267 2443 ntBASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms