Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A3Q99624 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A3Q99624 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SLC38A3Q99624 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A3Q99624 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A3Q99624 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLC38A3Q99624 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.38■□□□□ 0.69
SLC38A3Q99624 SNORA78-201ENST00000459373 127 ntBASIC19.38■□□□□ 0.69
SLC38A3Q99624 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A3Q99624 PTBP1P-201ENST00000554374 1601 ntBASIC19.38■□□□□ 0.69
SLC38A3Q99624 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC38A3Q99624 AC007225.1-201ENST00000566331 1836 ntBASIC19.38■□□□□ 0.69
SLC38A3Q99624 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A3Q99624 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A3Q99624 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A3Q99624 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLC38A3Q99624 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A3Q99624 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A3Q99624 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A3Q99624 AL135905.2-201ENST00000584934 1404 ntBASIC19.37■□□□□ 0.69
SLC38A3Q99624 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A3Q99624 RPS2P55-201ENST00000397318 883 ntBASIC19.37■□□□□ 0.69
SLC38A3Q99624 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC38A3Q99624 AC012618.2-201ENST00000428058 849 ntBASIC19.37■□□□□ 0.69
SLC38A3Q99624 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SLC38A3Q99624 AC107956.1-201ENST00000494359 873 ntBASIC19.37■□□□□ 0.69
SLC38A3Q99624 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A3Q99624 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC38A3Q99624 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC38A3Q99624 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC38A3Q99624 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC38A3Q99624 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC38A3Q99624 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC38A3Q99624 AP001412.1-201ENST00000608405 714 ntBASIC19.37■□□□□ 0.69
SLC38A3Q99624 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A3Q99624 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A3Q99624 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A3Q99624 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC38A3Q99624 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A3Q99624 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A3Q99624 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A3Q99624 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 KRT8P17-201ENST00000453110 1448 ntBASIC19.36■□□□□ 0.69
SLC38A3Q99624 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A3Q99624 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A3Q99624 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A3Q99624 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A3Q99624 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A3Q99624 AC233702.5-201ENST00000584107 538 ntBASIC19.36■□□□□ 0.69
SLC38A3Q99624 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A3Q99624 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A3Q99624 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 AC005229.4-201ENST00000610085 2198 ntBASIC19.36■□□□□ 0.69
SLC38A3Q99624 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SLC38A3Q99624 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A3Q99624 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A3Q99624 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC38A3Q99624 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC38A3Q99624 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A3Q99624 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A3Q99624 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A3Q99624 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC38A3Q99624 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A3Q99624 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC38A3Q99624 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC38A3Q99624 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC38A3Q99624 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC38A3Q99624 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.35■□□□□ 0.69
SLC38A3Q99624 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SLC38A3Q99624 DPP3P2-201ENST00000416030 1696 ntBASIC19.35■□□□□ 0.69
SLC38A3Q99624 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A3Q99624 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A3Q99624 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A3Q99624 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A3Q99624 NBPF21P-201ENST00000425093 1451 ntBASIC19.35■□□□□ 0.69
SLC38A3Q99624 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A3Q99624 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SLC38A3Q99624 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC38A3Q99624 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC38A3Q99624 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC38A3Q99624 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SLC38A3Q99624 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC38A3Q99624 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC38A3Q99624 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC38A3Q99624 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC38A3Q99624 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC38A3Q99624 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.34■□□□□ 0.69
SLC38A3Q99624 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC38A3Q99624 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC38A3Q99624 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms