Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 YLL019W-AYLL019W-A 93 nt-0.14□□□□□ -2.43
ATG40Q99325 YLR041WYLR041W 321 nt-0.14□□□□□ -2.43
ATG40Q99325 snR60snR60 104 nt-0.15□□□□□ -2.43
ATG40Q99325 YFL063WYFL063W 456 nt-0.15□□□□□ -2.43
ATG40Q99325 YJL197C-AYJL197C-A 282 nt-0.17□□□□□ -2.44
ATG40Q99325 YBR072C-AYBR072C-A 162 nt-0.17□□□□□ -2.44
ATG40Q99325 YGR035CYGR035C 351 nt-0.18□□□□□ -2.44
ATG40Q99325 YGR069WYGR069W 336 nt-0.18□□□□□ -2.44
ATG40Q99325 YKL100W-AYKL100W-A 90 nt-0.18□□□□□ -2.44
ATG40Q99325 YPR016W-AYPR016W-A 261 nt-0.18□□□□□ -2.44
ATG40Q99325 YER053C-AYER053C-A 114 nt-0.2□□□□□ -2.44
ATG40Q99325 snR128snR128 126 nt-0.2□□□□□ -2.44
ATG40Q99325 YMR158W-BYMR158W-B 321 nt-0.21□□□□□ -2.44
ATG40Q99325 snR8snR8 190 nt-0.22□□□□□ -2.44
ATG40Q99325 YIL032CYIL032C 357 nt-0.22□□□□□ -2.44
ATG40Q99325 PRP39YML046W 1890 nt-0.23□□□□□ -2.45
ATG40Q99325 YAL063C-AYAL063C-A 291 nt-0.24□□□□□ -2.45
ATG40Q99325 YLR154W-FYLR154W-F 141 nt-0.24□□□□□ -2.45
ATG40Q99325 YMR193C-AYMR193C-A 387 nt-0.25□□□□□ -2.45
ATG40Q99325 YBR099CYBR099C 384 nt-0.26□□□□□ -2.45
ATG40Q99325 CSE1YGL238W 2883 nt-0.26□□□□□ -2.45
ATG40Q99325 YOR072W-BYOR072W-B 162 nt-0.27□□□□□ -2.45
ATG40Q99325 HTL1YCR020W-B 237 nt-0.28□□□□□ -2.45
ATG40Q99325 TFB5YDR079C-A 219 nt-0.29□□□□□ -2.46
ATG40Q99325 SDH6YDR379C-A 240 nt-0.29□□□□□ -2.46
ATG40Q99325 YAF9YNL107W 681 nt-0.29□□□□□ -2.46
ATG40Q99325 YOR015WYOR015W 360 nt-0.29□□□□□ -2.46
ATG40Q99325 YCR038W-AYCR038W-A 126 nt-0.3□□□□□ -2.46
ATG40Q99325 YLR222C-AYLR222C-A 231 nt-0.3□□□□□ -2.46
ATG40Q99325 YNL028WYNL028W 318 nt-0.3□□□□□ -2.46
ATG40Q99325 EST1YLR233C 2100 nt-0.31□□□□□ -2.46
ATG40Q99325 GLG1YKR058W 1851 nt-0.32□□□□□ -2.46
ATG40Q99325 HMRA1YCR097W 381 nt-0.32□□□□□ -2.46
ATG40Q99325 YDR102CYDR102C 333 nt-0.32□□□□□ -2.46
ATG40Q99325 YDR157WYDR157W 402 nt-0.33□□□□□ -2.46
ATG40Q99325 YIL002W-AYIL002W-A 210 nt-0.33□□□□□ -2.46
ATG40Q99325 APQ12YIL040W 417 nt-0.33□□□□□ -2.46
ATG40Q99325 RAD61YDR014W 1944 nt-0.34□□□□□ -2.46
ATG40Q99325 YDR544CYDR544C 429 nt-0.34□□□□□ -2.46
ATG40Q99325 SBH2YER019C-A 267 nt-0.34□□□□□ -2.46
ATG40Q99325 UTP8YGR128C 2142 nt-0.34□□□□□ -2.46
ATG40Q99325 snR74snR74 88 nt-0.35□□□□□ -2.47
ATG40Q99325 YGR164WYGR164W 336 nt-0.35□□□□□ -2.47
ATG40Q99325 YDR210WYDR210W 228 nt-0.36□□□□□ -2.47
ATG40Q99325 ATP6Q0085 780 nt-0.36□□□□□ -2.47
ATG40Q99325 YGL149WYGL149W 306 nt-0.36□□□□□ -2.47
ATG40Q99325 YLR120W-AYLR120W-A 102 nt-0.36□□□□□ -2.47
ATG40Q99325 snR36snR36 182 nt-0.37□□□□□ -2.47
ATG40Q99325 TAH1YCR060W 336 nt-0.39□□□□□ -2.47
ATG40Q99325 YDR183C-AYDR183C-A 258 nt-0.4□□□□□ -2.47
ATG40Q99325 VAR1Q0140 1197 nt-0.4□□□□□ -2.47
ATG40Q99325 COG6YNL041C 2520 nt-0.43□□□□□ -2.48
ATG40Q99325 YDR118W-AYDR118W-A 117 nt-0.44□□□□□ -2.48
ATG40Q99325 YGL052WYGL052W 306 nt-0.44□□□□□ -2.48
ATG40Q99325 YPL038W-AYPL038W-A 192 nt-0.44□□□□□ -2.48
ATG40Q99325 YMR172C-AYMR172C-A 384 nt-0.45□□□□□ -2.48
ATG40Q99325 snR46snR46 197 nt-0.45□□□□□ -2.48
ATG40Q99325 YFL032WYFL032W 321 nt-0.46□□□□□ -2.48
ATG40Q99325 YPR197CYPR197C 564 nt-0.46□□□□□ -2.48
ATG40Q99325 Q0144Q0144 330 nt-0.48□□□□□ -2.49
ATG40Q99325 YBL039C-AYBL039C-A 84 nt-0.5□□□□□ -2.49
ATG40Q99325 URB1YKL014C 5295 nt-0.51□□□□□ -2.49
ATG40Q99325 YIR030W-AYIR030W-A 384 nt-0.53□□□□□ -2.49
ATG40Q99325 YML099W-AYML099W-A 330 nt-0.53□□□□□ -2.49
ATG40Q99325 YOR314W-AYOR314W-A 111 nt-0.53□□□□□ -2.49
ATG40Q99325 YPR170W-AYPR170W-A 186 nt-0.53□□□□□ -2.49
ATG40Q99325 SEC10YLR166C 2616 nt-0.53□□□□□ -2.49
ATG40Q99325 YDR413CYDR413C 576 nt-0.55□□□□□ -2.5
ATG40Q99325 YIL071W-AYIL071W-A 477 nt-0.55□□□□□ -2.5
ATG40Q99325 YDL240C-AYDL240C-A 138 nt-0.56□□□□□ -2.5
ATG40Q99325 YGL041CYGL041C 204 nt-0.56□□□□□ -2.5
ATG40Q99325 YPL060C-AYPL060C-A 3315 nt-0.56□□□□□ -2.5
ATG40Q99325 YER097WYER097W 330 nt-0.58□□□□□ -2.5
ATG40Q99325 YGL182CYGL182C 324 nt-0.58□□□□□ -2.5
ATG40Q99325 YNL067W-BYNL067W-B 141 nt-0.58□□□□□ -2.5
ATG40Q99325 YOR008C-AYOR008C-A 225 nt-0.58□□□□□ -2.5
ATG40Q99325 YDL007C-AYDL007C-A 258 nt-0.59□□□□□ -2.5
ATG40Q99325 YPR012WYPR012W 255 nt-0.59□□□□□ -2.5
ATG40Q99325 YML100W-AYML100W-A 174 nt-0.6□□□□□ -2.51
ATG40Q99325 YBR182C-AYBR182C-A 195 nt-0.6□□□□□ -2.51
ATG40Q99325 RPL39YJL189W 156 nt-0.61□□□□□ -2.51
ATG40Q99325 YKL118WYKL118W 312 nt-0.61□□□□□ -2.51
ATG40Q99325 PAU9YBL108C-A 129 nt-0.63□□□□□ -2.51
ATG40Q99325 tA(UGC)QtA(UGC)Q 76 nt-0.64□□□□□ -2.51
ATG40Q99325 YEL014CYEL014C 306 nt-0.64□□□□□ -2.51
ATG40Q99325 YPR010C-AYPR010C-A 219 nt-0.64□□□□□ -2.51
ATG40Q99325 tF(GAA)QtF(GAA)Q 75 nt-0.65□□□□□ -2.51
ATG40Q99325 YFL019CYFL019C 354 nt-0.65□□□□□ -2.51
ATG40Q99325 YNL277W-AYNL277W-A 189 nt-0.65□□□□□ -2.51
ATG40Q99325 tQ(UUG)QtQ(UUG)Q 76 nt-0.66□□□□□ -2.52
ATG40Q99325 YJL077W-AYJL077W-A 87 nt-0.66□□□□□ -2.52
ATG40Q99325 YBR131C-AYBR131C-A 90 nt-0.66□□□□□ -2.52
ATG40Q99325 YJL182CYJL182C 318 nt-0.69□□□□□ -2.52
ATG40Q99325 RPM2YML091C 3609 nt-0.7□□□□□ -2.52
ATG40Q99325 GIM4YEL003W 336 nt-0.7□□□□□ -2.52
ATG40Q99325 YOR381W-AYOR381W-A 168 nt-0.7□□□□□ -2.52
ATG40Q99325 snR69snR69 101 nt-0.72□□□□□ -2.52
ATG40Q99325 YER181CYER181C 324 nt-0.73□□□□□ -2.53
ATG40Q99325 tM(CAU)Q2tM(CAU)Q2 78 nt-0.73□□□□□ -2.53
ATG40Q99325 YJL113WYJL113W 4647 nt-0.75□□□□□ -2.53
Retrieved 100 of 7,029 protein–RNA pairs in 79.9 ms