Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC091874.3-201ENST00000512672 1195 ntBASIC23.67■■□□□ 1.38
NEK1Q96PY6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
NEK1Q96PY6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.67■■□□□ 1.38
NEK1Q96PY6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.67■■□□□ 1.38
NEK1Q96PY6 AL109923.1-201ENST00000618799 583 ntBASIC23.67■■□□□ 1.38
NEK1Q96PY6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.67■■□□□ 1.38
NEK1Q96PY6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.67■■□□□ 1.38
NEK1Q96PY6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.67■■□□□ 1.38
NEK1Q96PY6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 KRT16P6-202ENST00000425692 1426 ntBASIC23.67■■□□□ 1.38
NEK1Q96PY6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
NEK1Q96PY6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK1Q96PY6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NEK1Q96PY6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK1Q96PY6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK1Q96PY6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.66■■□□□ 1.38
NEK1Q96PY6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
NEK1Q96PY6 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.66■■□□□ 1.38
NEK1Q96PY6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NEK1Q96PY6 MIR4758-201ENST00000577688 71 ntBASIC23.66■■□□□ 1.38
NEK1Q96PY6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.66■■□□□ 1.38
NEK1Q96PY6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK1Q96PY6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK1Q96PY6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK1Q96PY6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK1Q96PY6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK1Q96PY6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NEK1Q96PY6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
NEK1Q96PY6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NEK1Q96PY6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.65■■□□□ 1.38
NEK1Q96PY6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NEK1Q96PY6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.65■■□□□ 1.38
NEK1Q96PY6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NEK1Q96PY6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.65■■□□□ 1.38
NEK1Q96PY6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.65■■□□□ 1.38
NEK1Q96PY6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.65■■□□□ 1.38
NEK1Q96PY6 AL138781.1-201ENST00000566567 1274 ntBASIC23.65■■□□□ 1.38
NEK1Q96PY6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.65■■□□□ 1.38
NEK1Q96PY6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NEK1Q96PY6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.65■■□□□ 1.38
NEK1Q96PY6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
NEK1Q96PY6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NEK1Q96PY6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NEK1Q96PY6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.64■■□□□ 1.38
NEK1Q96PY6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
NEK1Q96PY6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.64■■□□□ 1.38
NEK1Q96PY6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.64■■□□□ 1.38
NEK1Q96PY6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.64■■□□□ 1.37
NEK1Q96PY6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.64■■□□□ 1.37
NEK1Q96PY6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NEK1Q96PY6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NEK1Q96PY6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
NEK1Q96PY6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NEK1Q96PY6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NEK1Q96PY6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NEK1Q96PY6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
NEK1Q96PY6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.63■■□□□ 1.37
NEK1Q96PY6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.63■■□□□ 1.37
NEK1Q96PY6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK1Q96PY6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.63■■□□□ 1.37
NEK1Q96PY6 TMEM179-206ENST00000616017 1645 ntBASIC23.63■■□□□ 1.37
NEK1Q96PY6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NEK1Q96PY6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.63■■□□□ 1.37
NEK1Q96PY6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.63■■□□□ 1.37
NEK1Q96PY6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK1Q96PY6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK1Q96PY6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.63■■□□□ 1.37
NEK1Q96PY6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.63■■□□□ 1.37
NEK1Q96PY6 AC104771.1-201ENST00000603335 964 ntBASIC23.63■■□□□ 1.37
NEK1Q96PY6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
NEK1Q96PY6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NEK1Q96PY6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.63■■□□□ 1.37
NEK1Q96PY6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.63■■□□□ 1.37
NEK1Q96PY6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK1Q96PY6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.62■■□□□ 1.37
NEK1Q96PY6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.62■■□□□ 1.37
NEK1Q96PY6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.62■■□□□ 1.37
NEK1Q96PY6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
NEK1Q96PY6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NEK1Q96PY6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NEK1Q96PY6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NEK1Q96PY6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NEK1Q96PY6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NEK1Q96PY6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.62■■□□□ 1.37
NEK1Q96PY6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.62■■□□□ 1.37
NEK1Q96PY6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NEK1Q96PY6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.62■■□□□ 1.37
NEK1Q96PY6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NEK1Q96PY6 MYC-209ENST00000641252 345 ntBASIC23.62■■□□□ 1.37
NEK1Q96PY6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NEK1Q96PY6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
NEK1Q96PY6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NEK1Q96PY6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.62■■□□□ 1.37
NEK1Q96PY6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.62■■□□□ 1.37
NEK1Q96PY6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms