Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 SOX15-203ENST00000570788 1093 ntBASIC16.64■□□□□ 0.25
GAFA1Q96PS6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.63■□□□□ 0.25
GAFA1Q96PS6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 TCF3P1-201ENST00000423021 1937 ntBASIC16.62■□□□□ 0.25
GAFA1Q96PS6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 UNC93B5-201ENST00000530315 699 ntBASIC16.62■□□□□ 0.25
GAFA1Q96PS6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 AC073130.3-201ENST00000624389 2278 ntBASIC16.62■□□□□ 0.25
GAFA1Q96PS6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAFA1Q96PS6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 AC112907.3-201ENST00000577781 2400 ntBASIC16.61■□□□□ 0.25
GAFA1Q96PS6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms