Protein–RNA interactions for Protein: Q96NL0

RUNDC3B, RUN domain-containing protein 3B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3BQ96NL0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.67■□□□□ 0.9
RUNDC3BQ96NL0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3BQ96NL0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3BQ96NL0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RUNDC3BQ96NL0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.64■□□□□ 0.9
RUNDC3BQ96NL0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RUNDC3BQ96NL0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RUNDC3BQ96NL0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
RUNDC3BQ96NL0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 KRT16P6-202ENST00000425692 1426 ntBASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3BQ96NL0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RUNDC3BQ96NL0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.63■□□□□ 0.89
RUNDC3BQ96NL0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RUNDC3BQ96NL0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms