Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 FEM1AP1-201ENST00000431297 1995 ntBASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
PHACTR3Q96KR7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 AL512408.1-201ENST00000569378 2000 ntBASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
PHACTR3Q96KR7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PHACTR3Q96KR7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PHACTR3Q96KR7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PHACTR3Q96KR7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PHACTR3Q96KR7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PHACTR3Q96KR7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
PHACTR3Q96KR7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PHACTR3Q96KR7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PHACTR3Q96KR7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PHACTR3Q96KR7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PHACTR3Q96KR7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PHACTR3Q96KR7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PHACTR3Q96KR7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PHACTR3Q96KR7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 RPS2P55-201ENST00000397318 883 ntBASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 AC107956.1-201ENST00000494359 873 ntBASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PHACTR3Q96KR7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 PRKY-204ENST00000533551 1019 ntBASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 AL121906.2-201ENST00000621597 723 ntBASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 AL157384.1-201ENST00000445995 2473 ntBASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 NBPF21P-201ENST00000425093 1451 ntBASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC26.23■■□□□ 1.79
PHACTR3Q96KR7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PHACTR3Q96KR7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PHACTR3Q96KR7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC26.22■■□□□ 1.79
PHACTR3Q96KR7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
PHACTR3Q96KR7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
PHACTR3Q96KR7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
PHACTR3Q96KR7 AC233702.5-201ENST00000584107 538 ntBASIC26.22■■□□□ 1.79
PHACTR3Q96KR7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms