Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMD4Q96H15 MIR718-201ENST00000390190 70 ntBASIC16.8■□□□□ 0.28
TIMD4Q96H15 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMD4Q96H15 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 AL121906.2-201ENST00000621597 723 ntBASIC16.8■□□□□ 0.28
TIMD4Q96H15 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMD4Q96H15 AC092720.2-201ENST00000602388 1665 ntBASIC16.8■□□□□ 0.28
TIMD4Q96H15 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMD4Q96H15 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMD4Q96H15 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMD4Q96H15 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMD4Q96H15 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TIMD4Q96H15 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TIMD4Q96H15 AL121603.2-201ENST00000557373 2117 ntBASIC16.79■□□□□ 0.28
TIMD4Q96H15 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMD4Q96H15 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TIMD4Q96H15 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TIMD4Q96H15 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMD4Q96H15 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.79■□□□□ 0.28
TIMD4Q96H15 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMD4Q96H15 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TIMD4Q96H15 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.79■□□□□ 0.28
TIMD4Q96H15 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.79■□□□□ 0.28
TIMD4Q96H15 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.79■□□□□ 0.28
TIMD4Q96H15 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.79■□□□□ 0.28
TIMD4Q96H15 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.79■□□□□ 0.28
TIMD4Q96H15 AC233263.1-201ENST00000578059 224 ntBASIC16.79■□□□□ 0.28
TIMD4Q96H15 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.79■□□□□ 0.28
TIMD4Q96H15 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.79■□□□□ 0.28
TIMD4Q96H15 MTDHP1-201ENST00000605323 784 ntBASIC16.79■□□□□ 0.28
TIMD4Q96H15 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMD4Q96H15 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMD4Q96H15 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMD4Q96H15 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMD4Q96H15 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMD4Q96H15 KRT8P17-201ENST00000453110 1448 ntBASIC16.78■□□□□ 0.28
TIMD4Q96H15 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TIMD4Q96H15 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMD4Q96H15 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.77■□□□□ 0.28
TIMD4Q96H15 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TIMD4Q96H15 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMD4Q96H15 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMD4Q96H15 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.77■□□□□ 0.28
TIMD4Q96H15 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TIMD4Q96H15 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TIMD4Q96H15 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TIMD4Q96H15 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.77■□□□□ 0.28
TIMD4Q96H15 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMD4Q96H15 AL121829.2-201ENST00000620908 328 ntBASIC16.77■□□□□ 0.28
TIMD4Q96H15 AL023875.1-201ENST00000640777 796 ntBASIC16.77■□□□□ 0.28
TIMD4Q96H15 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMD4Q96H15 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.77■□□□□ 0.27
TIMD4Q96H15 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIMD4Q96H15 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIMD4Q96H15 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.77■□□□□ 0.27
TIMD4Q96H15 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIMD4Q96H15 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIMD4Q96H15 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIMD4Q96H15 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms