Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 LINC02228-203ENST00000641970 1355 ntBASIC18.98■□□□□ 0.63
LRRC58Q96CX6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.98■□□□□ 0.63
LRRC58Q96CX6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC58Q96CX6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 CDV3P1-201ENST00000471403 739 ntBASIC18.97■□□□□ 0.63
LRRC58Q96CX6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC58Q96CX6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 AL356652.1-201ENST00000615962 565 ntBASIC18.96■□□□□ 0.63
LRRC58Q96CX6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC58Q96CX6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 PGM5P4-201ENST00000421970 445 ntBASIC18.95■□□□□ 0.62
LRRC58Q96CX6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRC58Q96CX6 AC093503.3-201ENST00000624917 2352 ntBASIC18.95■□□□□ 0.62
LRRC58Q96CX6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms