Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF25Q96BH1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF25Q96BH1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RNF25Q96BH1 BX119927.1-201ENST00000636596 1552 ntBASIC20.96■□□□□ 0.95
RNF25Q96BH1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF25Q96BH1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF25Q96BH1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF25Q96BH1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF25Q96BH1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF25Q96BH1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF25Q96BH1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNF25Q96BH1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
RNF25Q96BH1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RNF25Q96BH1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF25Q96BH1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RNF25Q96BH1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF25Q96BH1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF25Q96BH1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF25Q96BH1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF25Q96BH1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF25Q96BH1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF25Q96BH1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF25Q96BH1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.94■□□□□ 0.94
RNF25Q96BH1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF25Q96BH1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF25Q96BH1 BID-214ENST00000617586 542 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF25Q96BH1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF25Q96BH1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF25Q96BH1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF25Q96BH1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF25Q96BH1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF25Q96BH1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF25Q96BH1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF25Q96BH1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RNF25Q96BH1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF25Q96BH1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RNF25Q96BH1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RNF25Q96BH1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RNF25Q96BH1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF25Q96BH1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF25Q96BH1 MIR5787-201ENST00000611784 55 ntBASIC20.93■□□□□ 0.94
RNF25Q96BH1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RNF25Q96BH1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
RNF25Q96BH1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF25Q96BH1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF25Q96BH1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF25Q96BH1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF25Q96BH1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF25Q96BH1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF25Q96BH1 MCRIP2P1-201ENST00000394346 511 ntBASIC20.92■□□□□ 0.94
RNF25Q96BH1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF25Q96BH1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF25Q96BH1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF25Q96BH1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF25Q96BH1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF25Q96BH1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF25Q96BH1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RNF25Q96BH1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF25Q96BH1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF25Q96BH1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
RNF25Q96BH1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF25Q96BH1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF25Q96BH1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF25Q96BH1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF25Q96BH1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF25Q96BH1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF25Q96BH1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF25Q96BH1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.91■□□□□ 0.94
RNF25Q96BH1 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.91■□□□□ 0.94
RNF25Q96BH1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF25Q96BH1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF25Q96BH1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF25Q96BH1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF25Q96BH1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF25Q96BH1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms