Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 MIR2861-201ENST00000636310 90 ntBASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SH3KBP1Q96B97 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3KBP1Q96B97 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SH3KBP1Q96B97 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 AC008403.3-201ENST00000598924 454 ntBASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 AC066615.1-201ENST00000640911 628 ntBASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3KBP1Q96B97 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 AC092667.1-201ENST00000434301 2586 ntBASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 SOX15-203ENST00000570788 1093 ntBASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 AC073648.6-201ENST00000641589 218 ntBASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3KBP1Q96B97 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms