Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC26.12■■□□□ 1.77
RTF1Q92541 AL137060.1-201ENST00000618151 2648 ntBASIC26.12■■□□□ 1.77
RTF1Q92541 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC26.12■■□□□ 1.77
RTF1Q92541 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC26.12■■□□□ 1.77
RTF1Q92541 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTF1Q92541 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RTF1Q92541 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RTF1Q92541 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
RTF1Q92541 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
RTF1Q92541 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RTF1Q92541 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
RTF1Q92541 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC26.11■■□□□ 1.77
RTF1Q92541 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RTF1Q92541 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC26.11■■□□□ 1.77
RTF1Q92541 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.11■■□□□ 1.77
RTF1Q92541 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC26.11■■□□□ 1.77
RTF1Q92541 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
RTF1Q92541 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RTF1Q92541 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.11■■□□□ 1.77
RTF1Q92541 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC26.11■■□□□ 1.77
RTF1Q92541 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC26.11■■□□□ 1.77
RTF1Q92541 NBPF21P-201ENST00000425093 1451 ntBASIC26.11■■□□□ 1.77
RTF1Q92541 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTF1Q92541 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTF1Q92541 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTF1Q92541 TREX2-204ENST00000370212 861 ntTSL 5 BASIC26.1■■□□□ 1.77
RTF1Q92541 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
RTF1Q92541 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
RTF1Q92541 RPS2P55-201ENST00000397318 883 ntBASIC26.1■■□□□ 1.77
RTF1Q92541 AC012618.2-201ENST00000428058 849 ntBASIC26.1■■□□□ 1.77
RTF1Q92541 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
RTF1Q92541 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RTF1Q92541 AC107956.1-201ENST00000494359 873 ntBASIC26.1■■□□□ 1.77
RTF1Q92541 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.1■■□□□ 1.77
RTF1Q92541 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RTF1Q92541 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC26.1■■□□□ 1.77
RTF1Q92541 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTF1Q92541 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RTF1Q92541 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTF1Q92541 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTF1Q92541 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTF1Q92541 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RTF1Q92541 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTF1Q92541 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTF1Q92541 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.09■■□□□ 1.77
RTF1Q92541 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
RTF1Q92541 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC26.09■■□□□ 1.77
RTF1Q92541 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTF1Q92541 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RTF1Q92541 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC26.09■■□□□ 1.77
RTF1Q92541 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTF1Q92541 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTF1Q92541 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTF1Q92541 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC26.09■■□□□ 1.77
RTF1Q92541 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RTF1Q92541 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC26.08■■□□□ 1.77
RTF1Q92541 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
RTF1Q92541 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
RTF1Q92541 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC26.08■■□□□ 1.77
RTF1Q92541 KRT16P6-202ENST00000425692 1426 ntBASIC26.08■■□□□ 1.77
RTF1Q92541 AL135905.2-201ENST00000584934 1404 ntBASIC26.08■■□□□ 1.77
RTF1Q92541 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC26.08■■□□□ 1.77
RTF1Q92541 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTF1Q92541 MDFI-202ENST00000373050 809 ntTSL 2 BASIC26.08■■□□□ 1.77
RTF1Q92541 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
RTF1Q92541 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
RTF1Q92541 MIR4497-201ENST00000583208 89 ntBASIC26.08■■□□□ 1.77
RTF1Q92541 AC233702.5-201ENST00000584107 538 ntBASIC26.08■■□□□ 1.77
RTF1Q92541 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTF1Q92541 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RTF1Q92541 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RTF1Q92541 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTF1Q92541 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTF1Q92541 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RTF1Q92541 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC26.07■■□□□ 1.76
RTF1Q92541 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC26.07■■□□□ 1.76
RTF1Q92541 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC26.07■■□□□ 1.76
RTF1Q92541 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RTF1Q92541 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC26.07■■□□□ 1.76
RTF1Q92541 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RTF1Q92541 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTF1Q92541 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTF1Q92541 SNORA78-201ENST00000459373 127 ntBASIC26.07■■□□□ 1.76
RTF1Q92541 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC26.07■■□□□ 1.76
RTF1Q92541 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RTF1Q92541 F2R-202ENST00000505600 442 ntTSL 2 BASIC26.07■■□□□ 1.76
RTF1Q92541 RARRES2P10-201ENST00000564312 460 ntBASIC26.07■■□□□ 1.76
RTF1Q92541 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC26.07■■□□□ 1.76
RTF1Q92541 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
RTF1Q92541 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTF1Q92541 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
RTF1Q92541 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTF1Q92541 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTF1Q92541 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTF1Q92541 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RTF1Q92541 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTF1Q92541 SMG8-203ENST00000578922 2178 ntBASIC26.06■■□□□ 1.76
RTF1Q92541 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTF1Q92541 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC26.06■■□□□ 1.76
RTF1Q92541 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms