Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CT55Q8WUE5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CT55Q8WUE5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CT55Q8WUE5 MMP23A-201ENST00000234610 1017 ntBASIC18.69■□□□□ 0.58
CT55Q8WUE5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CT55Q8WUE5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.69■□□□□ 0.58
CT55Q8WUE5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CT55Q8WUE5 NUDT16P1-203ENST00000513809 620 ntBASIC18.69■□□□□ 0.58
CT55Q8WUE5 AC010331.1-201ENST00000611423 582 ntBASIC18.69■□□□□ 0.58
CT55Q8WUE5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CT55Q8WUE5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.69■□□□□ 0.58
CT55Q8WUE5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CT55Q8WUE5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CT55Q8WUE5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CT55Q8WUE5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CT55Q8WUE5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CT55Q8WUE5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CT55Q8WUE5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CT55Q8WUE5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CT55Q8WUE5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CT55Q8WUE5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.68■□□□□ 0.58
CT55Q8WUE5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CT55Q8WUE5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CT55Q8WUE5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CT55Q8WUE5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CT55Q8WUE5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CT55Q8WUE5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.68■□□□□ 0.58
CT55Q8WUE5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.68■□□□□ 0.58
CT55Q8WUE5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CT55Q8WUE5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CT55Q8WUE5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CT55Q8WUE5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CT55Q8WUE5 AC005229.4-201ENST00000610085 2198 ntBASIC18.67■□□□□ 0.58
CT55Q8WUE5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CT55Q8WUE5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CT55Q8WUE5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CT55Q8WUE5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.67■□□□□ 0.58
CT55Q8WUE5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.67■□□□□ 0.58
CT55Q8WUE5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.67■□□□□ 0.58
CT55Q8WUE5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.67■□□□□ 0.58
CT55Q8WUE5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CT55Q8WUE5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.67■□□□□ 0.58
CT55Q8WUE5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CT55Q8WUE5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CT55Q8WUE5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CT55Q8WUE5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.67■□□□□ 0.58
CT55Q8WUE5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CT55Q8WUE5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CT55Q8WUE5 DPP3P2-201ENST00000416030 1696 ntBASIC18.66■□□□□ 0.58
CT55Q8WUE5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CT55Q8WUE5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CT55Q8WUE5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CT55Q8WUE5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CT55Q8WUE5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CT55Q8WUE5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.66■□□□□ 0.58
CT55Q8WUE5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.66■□□□□ 0.58
CT55Q8WUE5 RBM17P1-201ENST00000453646 1190 ntBASIC18.66■□□□□ 0.58
CT55Q8WUE5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CT55Q8WUE5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.66■□□□□ 0.58
CT55Q8WUE5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CT55Q8WUE5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.66■□□□□ 0.58
CT55Q8WUE5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.66■□□□□ 0.58
CT55Q8WUE5 REXO1L10P-201ENST00000615707 1290 ntBASIC18.66■□□□□ 0.58
CT55Q8WUE5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.66■□□□□ 0.58
CT55Q8WUE5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.66■□□□□ 0.58
CT55Q8WUE5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CT55Q8WUE5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CT55Q8WUE5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CT55Q8WUE5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CT55Q8WUE5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CT55Q8WUE5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
CT55Q8WUE5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CT55Q8WUE5 RCN1P1-201ENST00000400413 996 ntBASIC18.65■□□□□ 0.58
CT55Q8WUE5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
CT55Q8WUE5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
CT55Q8WUE5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 CR392000.1-201ENST00000624770 1228 ntBASIC18.65■□□□□ 0.58
CT55Q8WUE5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CT55Q8WUE5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CT55Q8WUE5 AC006128.1-201ENST00000624704 1661 ntBASIC18.65■□□□□ 0.58
CT55Q8WUE5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CT55Q8WUE5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CT55Q8WUE5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CT55Q8WUE5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CT55Q8WUE5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CT55Q8WUE5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms