Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 TERC-201ENST00000602385 541 ntBASIC18.2■□□□□ 0.5
CHD6Q8TD26 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.2■□□□□ 0.5
CHD6Q8TD26 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD6Q8TD26 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD6Q8TD26 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD6Q8TD26 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD6Q8TD26 BX119927.1-201ENST00000636596 1552 ntBASIC18.19■□□□□ 0.5
CHD6Q8TD26 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD6Q8TD26 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD6Q8TD26 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD6Q8TD26 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD6Q8TD26 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD6Q8TD26 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.19■□□□□ 0.5
CHD6Q8TD26 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD6Q8TD26 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.19■□□□□ 0.5
CHD6Q8TD26 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD6Q8TD26 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHD6Q8TD26 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD6Q8TD26 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD6Q8TD26 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CHD6Q8TD26 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.19■□□□□ 0.5
CHD6Q8TD26 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.19■□□□□ 0.5
CHD6Q8TD26 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.19■□□□□ 0.5
CHD6Q8TD26 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD6Q8TD26 AC091304.2-201ENST00000564639 760 ntBASIC18.19■□□□□ 0.5
CHD6Q8TD26 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD6Q8TD26 AP003733.4-201ENST00000623785 1697 ntBASIC18.19■□□□□ 0.5
CHD6Q8TD26 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD6Q8TD26 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD6Q8TD26 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.18■□□□□ 0.5
CHD6Q8TD26 TPSP2-201ENST00000561760 610 ntBASIC18.18■□□□□ 0.5
CHD6Q8TD26 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHD6Q8TD26 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD6Q8TD26 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD6Q8TD26 YBX1P10-201ENST00000444752 975 ntBASIC18.18■□□□□ 0.5
CHD6Q8TD26 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.18■□□□□ 0.5
CHD6Q8TD26 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CHD6Q8TD26 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.18■□□□□ 0.5
CHD6Q8TD26 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHD6Q8TD26 AL139125.2-201ENST00000623134 1869 ntBASIC18.18■□□□□ 0.5
CHD6Q8TD26 PMS2P7-201ENST00000506558 1336 ntBASIC18.18■□□□□ 0.5
CHD6Q8TD26 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD6Q8TD26 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD6Q8TD26 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD6Q8TD26 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD6Q8TD26 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
CHD6Q8TD26 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.17■□□□□ 0.5
CHD6Q8TD26 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD6Q8TD26 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD6Q8TD26 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD6Q8TD26 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD6Q8TD26 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHD6Q8TD26 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.17■□□□□ 0.5
CHD6Q8TD26 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CHD6Q8TD26 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.17■□□□□ 0.5
CHD6Q8TD26 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHD6Q8TD26 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD6Q8TD26 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD6Q8TD26 AC096733.2-201ENST00000609937 1394 ntBASIC18.17■□□□□ 0.5
CHD6Q8TD26 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD6Q8TD26 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD6Q8TD26 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.17■□□□□ 0.5
CHD6Q8TD26 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD6Q8TD26 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD6Q8TD26 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHD6Q8TD26 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD6Q8TD26 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CHD6Q8TD26 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD6Q8TD26 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.16■□□□□ 0.5
CHD6Q8TD26 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD6Q8TD26 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.16■□□□□ 0.5
CHD6Q8TD26 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD6Q8TD26 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.16■□□□□ 0.5
CHD6Q8TD26 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CHD6Q8TD26 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD6Q8TD26 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD6Q8TD26 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD6Q8TD26 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD6Q8TD26 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CHD6Q8TD26 TSPY17P-201ENST00000450329 467 ntBASIC18.16■□□□□ 0.5
CHD6Q8TD26 AL121912.1-201ENST00000603683 238 ntBASIC18.16■□□□□ 0.5
CHD6Q8TD26 AC112497.1-201ENST00000624824 639 ntBASIC18.16■□□□□ 0.5
CHD6Q8TD26 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD6Q8TD26 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD6Q8TD26 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD6Q8TD26 HLA-G-202ENST00000376815 851 ntBASIC18.15■□□□□ 0.5
CHD6Q8TD26 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD6Q8TD26 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD6Q8TD26 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD6Q8TD26 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD6Q8TD26 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.15■□□□□ 0.5
CHD6Q8TD26 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.15■□□□□ 0.5
CHD6Q8TD26 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms