Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 AL358472.4-201ENST00000633140 710 ntBASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNIP1Q8TAD8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 AC027702.1-201ENST00000563810 1770 ntBASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 AC022616.7-201ENST00000525383 220 ntBASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 EGLN1P1-201ENST00000531623 762 ntBASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SNIP1Q8TAD8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 AP005242.2-201ENST00000580065 1175 ntBASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SNIP1Q8TAD8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms