Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAM1L1Q8N609 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 ITM2C-210ENST00000620962 501 ntBASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAM1L1Q8N609 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRAM1L1Q8N609 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.77■□□□□ 0.75
TRAM1L1Q8N609 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRAM1L1Q8N609 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 AC128676.1-201ENST00000454392 318 ntBASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 AC069544.1-201ENST00000609399 999 ntBASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 AC073648.6-201ENST00000641589 218 ntBASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRAM1L1Q8N609 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 AC124283.5-201ENST00000624661 1809 ntBASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAM1L1Q8N609 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 KRT18P29-201ENST00000397031 1267 ntBASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAM1L1Q8N609 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms