Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD3Q8N328 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD3Q8N328 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD3Q8N328 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.3■□□□□ 0.84
PGBD3Q8N328 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD3Q8N328 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD3Q8N328 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD3Q8N328 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD3Q8N328 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.3■□□□□ 0.84
PGBD3Q8N328 AC087499.1-201ENST00000418141 1075 ntBASIC20.3■□□□□ 0.84
PGBD3Q8N328 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD3Q8N328 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.3■□□□□ 0.84
PGBD3Q8N328 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.3■□□□□ 0.84
PGBD3Q8N328 AL355075.4-201ENST00000554988 638 ntBASIC20.3■□□□□ 0.84
PGBD3Q8N328 AC010331.1-201ENST00000611423 582 ntBASIC20.3■□□□□ 0.84
PGBD3Q8N328 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.3■□□□□ 0.84
PGBD3Q8N328 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PGBD3Q8N328 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD3Q8N328 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PGBD3Q8N328 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD3Q8N328 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD3Q8N328 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD3Q8N328 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.29■□□□□ 0.84
PGBD3Q8N328 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.29■□□□□ 0.84
PGBD3Q8N328 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.29■□□□□ 0.84
PGBD3Q8N328 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD3Q8N328 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PGBD3Q8N328 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD3Q8N328 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD3Q8N328 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PGBD3Q8N328 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.28■□□□□ 0.84
PGBD3Q8N328 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD3Q8N328 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD3Q8N328 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PGBD3Q8N328 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PGBD3Q8N328 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD3Q8N328 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PGBD3Q8N328 AL355355.2-201ENST00000442321 338 ntBASIC20.28■□□□□ 0.84
PGBD3Q8N328 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.28■□□□□ 0.84
PGBD3Q8N328 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD3Q8N328 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.28■□□□□ 0.84
PGBD3Q8N328 AL121829.2-201ENST00000620908 328 ntBASIC20.28■□□□□ 0.84
PGBD3Q8N328 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PGBD3Q8N328 HTR7P1-201ENST00000538670 1336 ntBASIC20.27■□□□□ 0.84
PGBD3Q8N328 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD3Q8N328 AC124283.5-201ENST00000624661 1809 ntBASIC20.27■□□□□ 0.84
PGBD3Q8N328 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD3Q8N328 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD3Q8N328 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD3Q8N328 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 AC026471.5-201ENST00000615068 467 ntBASIC20.27■□□□□ 0.84
PGBD3Q8N328 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PGBD3Q8N328 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PGBD3Q8N328 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.27■□□□□ 0.83
PGBD3Q8N328 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PGBD3Q8N328 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PGBD3Q8N328 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.27■□□□□ 0.83
PGBD3Q8N328 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PGBD3Q8N328 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.26■□□□□ 0.83
PGBD3Q8N328 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD3Q8N328 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.26■□□□□ 0.83
PGBD3Q8N328 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.26■□□□□ 0.83
PGBD3Q8N328 NBPF21P-201ENST00000425093 1451 ntBASIC20.26■□□□□ 0.83
PGBD3Q8N328 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD3Q8N328 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD3Q8N328 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.26■□□□□ 0.83
PGBD3Q8N328 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD3Q8N328 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PGBD3Q8N328 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD3Q8N328 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.26■□□□□ 0.83
PGBD3Q8N328 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.26■□□□□ 0.83
PGBD3Q8N328 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PGBD3Q8N328 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.26■□□□□ 0.83
PGBD3Q8N328 AC023632.3-201ENST00000521633 145 ntBASIC20.26■□□□□ 0.83
PGBD3Q8N328 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.26■□□□□ 0.83
PGBD3Q8N328 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.26■□□□□ 0.83
PGBD3Q8N328 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms