Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCML4Q8N228 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCML4Q8N228 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.81■□□□□ 0.92
SCML4Q8N228 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCML4Q8N228 AC124283.5-201ENST00000624661 1809 ntBASIC20.81■□□□□ 0.92
SCML4Q8N228 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCML4Q8N228 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCML4Q8N228 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.81■□□□□ 0.92
SCML4Q8N228 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCML4Q8N228 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.81■□□□□ 0.92
SCML4Q8N228 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.81■□□□□ 0.92
SCML4Q8N228 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.81■□□□□ 0.92
SCML4Q8N228 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.81■□□□□ 0.92
SCML4Q8N228 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.81■□□□□ 0.92
SCML4Q8N228 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.81■□□□□ 0.92
SCML4Q8N228 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.81■□□□□ 0.92
SCML4Q8N228 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCML4Q8N228 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SCML4Q8N228 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCML4Q8N228 PHGDH-210ENST00000641115 1638 ntBASIC20.81■□□□□ 0.92
SCML4Q8N228 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCML4Q8N228 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCML4Q8N228 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SCML4Q8N228 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.81■□□□□ 0.92
SCML4Q8N228 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SCML4Q8N228 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCML4Q8N228 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SCML4Q8N228 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.8■□□□□ 0.92
SCML4Q8N228 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCML4Q8N228 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCML4Q8N228 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCML4Q8N228 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCML4Q8N228 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCML4Q8N228 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.8■□□□□ 0.92
SCML4Q8N228 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCML4Q8N228 AC133681.1-201ENST00000465482 601 ntBASIC20.8■□□□□ 0.92
SCML4Q8N228 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
SCML4Q8N228 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.8■□□□□ 0.92
SCML4Q8N228 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SCML4Q8N228 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCML4Q8N228 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SCML4Q8N228 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.8■□□□□ 0.92
SCML4Q8N228 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SCML4Q8N228 AL157384.1-201ENST00000445995 2473 ntBASIC20.8■□□□□ 0.92
SCML4Q8N228 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
SCML4Q8N228 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCML4Q8N228 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SCML4Q8N228 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.79■□□□□ 0.92
SCML4Q8N228 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCML4Q8N228 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCML4Q8N228 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCML4Q8N228 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCML4Q8N228 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCML4Q8N228 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.79■□□□□ 0.92
SCML4Q8N228 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCML4Q8N228 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCML4Q8N228 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.79■□□□□ 0.92
SCML4Q8N228 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCML4Q8N228 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.79■□□□□ 0.92
SCML4Q8N228 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.79■□□□□ 0.92
SCML4Q8N228 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SCML4Q8N228 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCML4Q8N228 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.79■□□□□ 0.92
SCML4Q8N228 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCML4Q8N228 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.79■□□□□ 0.92
SCML4Q8N228 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.79■□□□□ 0.92
SCML4Q8N228 SLC25A24-204ENST00000569674 2357 ntBASIC20.79■□□□□ 0.92
SCML4Q8N228 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCML4Q8N228 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCML4Q8N228 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
SCML4Q8N228 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCML4Q8N228 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SCML4Q8N228 AC099778.1-201ENST00000568593 1911 ntBASIC20.78■□□□□ 0.92
SCML4Q8N228 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCML4Q8N228 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCML4Q8N228 TFP1-202ENST00000475455 1573 ntBASIC20.78■□□□□ 0.92
SCML4Q8N228 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCML4Q8N228 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.78■□□□□ 0.92
SCML4Q8N228 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.78■□□□□ 0.92
SCML4Q8N228 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.78■□□□□ 0.92
SCML4Q8N228 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.78■□□□□ 0.92
SCML4Q8N228 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCML4Q8N228 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCML4Q8N228 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SCML4Q8N228 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.78■□□□□ 0.92
SCML4Q8N228 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCML4Q8N228 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCML4Q8N228 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCML4Q8N228 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.77■□□□□ 0.92
SCML4Q8N228 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCML4Q8N228 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCML4Q8N228 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCML4Q8N228 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SCML4Q8N228 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCML4Q8N228 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.77■□□□□ 0.92
SCML4Q8N228 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.77■□□□□ 0.92
SCML4Q8N228 PRKY-204ENST00000533551 1019 ntBASIC20.77■□□□□ 0.92
SCML4Q8N228 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.77■□□□□ 0.92
SCML4Q8N228 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.77■□□□□ 0.92
SCML4Q8N228 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms