Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 AL356652.1-201ENST00000615962 565 ntBASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 BX323043.1-201ENST00000641006 1765 ntBASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC50Q8IVM0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 MIR6821-201ENST00000617625 74 ntBASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 AC087633.2-202ENST00000565166 1439 ntBASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC50Q8IVM0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 KRT18P11-201ENST00000435214 1283 ntBASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC50Q8IVM0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
CCDC50Q8IVM0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 AC013268.1-206ENST00000638368 961 ntBASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 AC112229.1-201ENST00000639295 961 ntBASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 CYP21A1P-202ENST00000354927 1481 ntBASIC21.01■□□□□ 0.95
CCDC50Q8IVM0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCDC50Q8IVM0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC50Q8IVM0 AC018445.3-201ENST00000624177 1945 ntBASIC21■□□□□ 0.95
CCDC50Q8IVM0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21■□□□□ 0.95
CCDC50Q8IVM0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC50Q8IVM0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC50Q8IVM0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC50Q8IVM0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
CCDC50Q8IVM0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC50Q8IVM0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC50Q8IVM0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms