Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 AC005829.2-201ENST00000571422 1056 ntBASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
LYSMD3Q7Z3D4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 AC006557.6-201ENST00000623071 864 ntBASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD3Q7Z3D4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 AC099778.1-201ENST00000568593 1911 ntBASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 HLA-G-202ENST00000376815 851 ntBASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 HLA-G-203ENST00000376818 1127 ntBASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 AL390719.1-204ENST00000412397 1219 ntBASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 TMEM191A-211ENST00000637163 1067 ntBASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.04■□□□□ 0.8
LYSMD3Q7Z3D4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 BX119927.1-201ENST00000636596 1552 ntBASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.03■□□□□ 0.8
LYSMD3Q7Z3D4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms