Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SCXQ7RTU7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
SCXQ7RTU7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
SCXQ7RTU7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SCXQ7RTU7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SCXQ7RTU7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.15□□□□□ -0.31
SCXQ7RTU7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.15□□□□□ -0.31
SCXQ7RTU7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 KRT17P1-201ENST00000399211 1546 ntBASIC13.14□□□□□ -0.31
SCXQ7RTU7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 LINC01006-201ENST00000333319 2292 ntBASIC13.14□□□□□ -0.31
SCXQ7RTU7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 AC093827.2-201ENST00000512654 315 ntBASIC13.14□□□□□ -0.31
SCXQ7RTU7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCXQ7RTU7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.14□□□□□ -0.31
SCXQ7RTU7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 CYP2T3P-201ENST00000601990 817 ntBASIC13.13□□□□□ -0.31
SCXQ7RTU7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC13.13□□□□□ -0.31
SCXQ7RTU7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCXQ7RTU7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SCXQ7RTU7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.12□□□□□ -0.31
SCXQ7RTU7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms