Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 AC116050.2-201ENST00000612102 1779 ntBASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 AC004408.2-201ENST00000623613 2777 ntBASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTCHD4Q6ZW05 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.33■□□□□ 0.53
PTCHD4Q6ZW05 AL691432.2-201ENST00000607222 2038 ntBASIC18.33■□□□□ 0.53
PTCHD4Q6ZW05 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PTCHD4Q6ZW05 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.33■□□□□ 0.53
PTCHD4Q6ZW05 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.33■□□□□ 0.53
PTCHD4Q6ZW05 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.33■□□□□ 0.53
PTCHD4Q6ZW05 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTCHD4Q6ZW05 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.33■□□□□ 0.52
PTCHD4Q6ZW05 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 DPP3P2-201ENST00000416030 1696 ntBASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 HCG11-201ENST00000411553 5696 ntBASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTCHD4Q6ZW05 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.31■□□□□ 0.52
PTCHD4Q6ZW05 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 KRT18P20-201ENST00000548986 1279 ntBASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 KRT18P61-201ENST00000585825 1298 ntBASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCHD4Q6ZW05 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms